Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.79■□□□□ 0.28
Chmp1aQ921W0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp1aQ921W0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp1aQ921W0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Chmp1aQ921W0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp1aQ921W0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp1aQ921W0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp1aQ921W0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp1aQ921W0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp1aQ921W0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.78■□□□□ 0.28
Chmp1aQ921W0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp1aQ921W0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Chmp1aQ921W0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp1aQ921W0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chmp1aQ921W0 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.78■□□□□ 0.28
Chmp1aQ921W0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp1aQ921W0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp1aQ921W0 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.78■□□□□ 0.28
Chmp1aQ921W0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp1aQ921W0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp1aQ921W0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Chmp1aQ921W0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp1aQ921W0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp1aQ921W0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp1aQ921W0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp1aQ921W0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Chmp1aQ921W0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp1aQ921W0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp1aQ921W0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.77■□□□□ 0.28
Chmp1aQ921W0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.77■□□□□ 0.28
Chmp1aQ921W0 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.77■□□□□ 0.28
Chmp1aQ921W0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp1aQ921W0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp1aQ921W0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp1aQ921W0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp1aQ921W0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp1aQ921W0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Chmp1aQ921W0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp1aQ921W0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp1aQ921W0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp1aQ921W0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Chmp1aQ921W0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.77■□□□□ 0.27
Chmp1aQ921W0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 BC021767-201ENSMUST00000126387 1716 ntBASIC16.76■□□□□ 0.27
Chmp1aQ921W0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp1aQ921W0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp1aQ921W0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp1aQ921W0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp1aQ921W0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp1aQ921W0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Chmp1aQ921W0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Chmp1aQ921W0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.75■□□□□ 0.27
Chmp1aQ921W0 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.75■□□□□ 0.27
Chmp1aQ921W0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp1aQ921W0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp1aQ921W0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp1aQ921W0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp1aQ921W0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp1aQ921W0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp1aQ921W0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp1aQ921W0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp1aQ921W0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp1aQ921W0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp1aQ921W0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.74■□□□□ 0.27
Chmp1aQ921W0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp1aQ921W0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Chmp1aQ921W0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp1aQ921W0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.74■□□□□ 0.27
Chmp1aQ921W0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.74■□□□□ 0.27
Chmp1aQ921W0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.74■□□□□ 0.27
Chmp1aQ921W0 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.74■□□□□ 0.27
Chmp1aQ921W0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp1aQ921W0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Chmp1aQ921W0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp1aQ921W0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp1aQ921W0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp1aQ921W0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp1aQ921W0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Chmp1aQ921W0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp1aQ921W0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms