Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdhb3Q91XZ7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Pcdhb3Q91XZ7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.95■□□□□ 0.62
Pcdhb3Q91XZ7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb3Q91XZ7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.95■□□□□ 0.62
Pcdhb3Q91XZ7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb3Q91XZ7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb3Q91XZ7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb3Q91XZ7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb3Q91XZ7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb3Q91XZ7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pcdhb3Q91XZ7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb3Q91XZ7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb3Q91XZ7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb3Q91XZ7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb3Q91XZ7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb3Q91XZ7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pcdhb3Q91XZ7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.94■□□□□ 0.62
Pcdhb3Q91XZ7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb3Q91XZ7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
Pcdhb3Q91XZ7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb3Q91XZ7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb3Q91XZ7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb3Q91XZ7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb3Q91XZ7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb3Q91XZ7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb3Q91XZ7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb3Q91XZ7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb3Q91XZ7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.93■□□□□ 0.62
Pcdhb3Q91XZ7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb3Q91XZ7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb3Q91XZ7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb3Q91XZ7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb3Q91XZ7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhb3Q91XZ7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhb3Q91XZ7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Pcdhb3Q91XZ7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb3Q91XZ7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.92■□□□□ 0.62
Pcdhb3Q91XZ7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.92■□□□□ 0.62
Pcdhb3Q91XZ7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhb3Q91XZ7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb3Q91XZ7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb3Q91XZ7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb3Q91XZ7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb3Q91XZ7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb3Q91XZ7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdhb3Q91XZ7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb3Q91XZ7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb3Q91XZ7 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.91■□□□□ 0.62
Pcdhb3Q91XZ7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb3Q91XZ7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdhb3Q91XZ7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.91■□□□□ 0.62
Pcdhb3Q91XZ7 Golgb1-201ENSMUST00000023534 498 ntBASIC18.91■□□□□ 0.62
Pcdhb3Q91XZ7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb3Q91XZ7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.91■□□□□ 0.62
Pcdhb3Q91XZ7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb3Q91XZ7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdhb3Q91XZ7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Pcdhb3Q91XZ7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb3Q91XZ7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhb3Q91XZ7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb3Q91XZ7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.9■□□□□ 0.62
Pcdhb3Q91XZ7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb3Q91XZ7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb3Q91XZ7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb3Q91XZ7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb3Q91XZ7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb3Q91XZ7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb3Q91XZ7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb3Q91XZ7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Pcdhb3Q91XZ7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb3Q91XZ7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Pcdhb3Q91XZ7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
Pcdhb3Q91XZ7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb3Q91XZ7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb3Q91XZ7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb3Q91XZ7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.89■□□□□ 0.61
Pcdhb3Q91XZ7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb3Q91XZ7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb3Q91XZ7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb3Q91XZ7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb3Q91XZ7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Pcdhb3Q91XZ7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb3Q91XZ7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Pcdhb3Q91XZ7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb3Q91XZ7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.89■□□□□ 0.61
Pcdhb3Q91XZ7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb3Q91XZ7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.88■□□□□ 0.61
Pcdhb3Q91XZ7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Pcdhb3Q91XZ7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb3Q91XZ7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb3Q91XZ7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb3Q91XZ7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Pcdhb3Q91XZ7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb3Q91XZ7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb3Q91XZ7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.88■□□□□ 0.61
Pcdhb3Q91XZ7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb3Q91XZ7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Pcdhb3Q91XZ7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb3Q91XZ7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms