Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slf1Q8R3P9 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.2■□□□□ 0.66
Slf1Q8R3P9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slf1Q8R3P9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slf1Q8R3P9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slf1Q8R3P9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slf1Q8R3P9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slf1Q8R3P9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slf1Q8R3P9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Slf1Q8R3P9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slf1Q8R3P9 Fst-202ENSMUST00000223640 2612 ntBASIC19.2■□□□□ 0.66
Slf1Q8R3P9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slf1Q8R3P9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slf1Q8R3P9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slf1Q8R3P9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slf1Q8R3P9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slf1Q8R3P9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slf1Q8R3P9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slf1Q8R3P9 Gm7417-201ENSMUST00000192950 473 ntBASIC19.19■□□□□ 0.66
Slf1Q8R3P9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.19■□□□□ 0.66
Slf1Q8R3P9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slf1Q8R3P9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slf1Q8R3P9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slf1Q8R3P9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slf1Q8R3P9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.18■□□□□ 0.66
Slf1Q8R3P9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slf1Q8R3P9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slf1Q8R3P9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slf1Q8R3P9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.18■□□□□ 0.66
Slf1Q8R3P9 Etf1-202ENSMUST00000180351 108 ntBASIC19.18■□□□□ 0.66
Slf1Q8R3P9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.18■□□□□ 0.66
Slf1Q8R3P9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slf1Q8R3P9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Slf1Q8R3P9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.18■□□□□ 0.66
Slf1Q8R3P9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slf1Q8R3P9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slf1Q8R3P9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Slf1Q8R3P9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Slf1Q8R3P9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Slf1Q8R3P9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slf1Q8R3P9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slf1Q8R3P9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slf1Q8R3P9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slf1Q8R3P9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.17■□□□□ 0.66
Slf1Q8R3P9 Gm7143-201ENSMUST00000222811 859 ntBASIC19.17■□□□□ 0.66
Slf1Q8R3P9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Slf1Q8R3P9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slf1Q8R3P9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slf1Q8R3P9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slf1Q8R3P9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slf1Q8R3P9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slf1Q8R3P9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slf1Q8R3P9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slf1Q8R3P9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Slf1Q8R3P9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slf1Q8R3P9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Slf1Q8R3P9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
Slf1Q8R3P9 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.16■□□□□ 0.66
Slf1Q8R3P9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slf1Q8R3P9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Slf1Q8R3P9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Slf1Q8R3P9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Slf1Q8R3P9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slf1Q8R3P9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slf1Q8R3P9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slf1Q8R3P9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slf1Q8R3P9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.15■□□□□ 0.66
Slf1Q8R3P9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slf1Q8R3P9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slf1Q8R3P9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slf1Q8R3P9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
Slf1Q8R3P9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Slf1Q8R3P9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.15■□□□□ 0.66
Slf1Q8R3P9 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.15■□□□□ 0.66
Slf1Q8R3P9 Gm9959-201ENSMUST00000068277 390 ntBASIC19.15■□□□□ 0.66
Slf1Q8R3P9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Slf1Q8R3P9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slf1Q8R3P9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slf1Q8R3P9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Slf1Q8R3P9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Slf1Q8R3P9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Slf1Q8R3P9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.14■□□□□ 0.65
Slf1Q8R3P9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Slf1Q8R3P9 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.14■□□□□ 0.65
Slf1Q8R3P9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slf1Q8R3P9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Slf1Q8R3P9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slf1Q8R3P9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slf1Q8R3P9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slf1Q8R3P9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slf1Q8R3P9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slf1Q8R3P9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slf1Q8R3P9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slf1Q8R3P9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slf1Q8R3P9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slf1Q8R3P9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.12■□□□□ 0.65
Slf1Q8R3P9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slf1Q8R3P9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slf1Q8R3P9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slf1Q8R3P9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms