Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Clrn1Q8K445 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clrn1Q8K445 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clrn1Q8K445 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clrn1Q8K445 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clrn1Q8K445 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clrn1Q8K445 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Clrn1Q8K445 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Clrn1Q8K445 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clrn1Q8K445 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clrn1Q8K445 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Clrn1Q8K445 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn1Q8K445 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn1Q8K445 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn1Q8K445 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Clrn1Q8K445 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.94■□□□□ 0.46
Clrn1Q8K445 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn1Q8K445 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn1Q8K445 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.94■□□□□ 0.46
Clrn1Q8K445 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn1Q8K445 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn1Q8K445 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.94■□□□□ 0.46
Clrn1Q8K445 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn1Q8K445 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn1Q8K445 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Clrn1Q8K445 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn1Q8K445 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn1Q8K445 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
Clrn1Q8K445 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Clrn1Q8K445 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clrn1Q8K445 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Clrn1Q8K445 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clrn1Q8K445 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.93■□□□□ 0.46
Clrn1Q8K445 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clrn1Q8K445 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Clrn1Q8K445 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.93■□□□□ 0.46
Clrn1Q8K445 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Clrn1Q8K445 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clrn1Q8K445 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Clrn1Q8K445 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Clrn1Q8K445 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clrn1Q8K445 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clrn1Q8K445 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Clrn1Q8K445 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Clrn1Q8K445 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn1Q8K445 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn1Q8K445 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Clrn1Q8K445 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn1Q8K445 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn1Q8K445 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn1Q8K445 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Clrn1Q8K445 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn1Q8K445 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn1Q8K445 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.92■□□□□ 0.46
Clrn1Q8K445 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn1Q8K445 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn1Q8K445 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn1Q8K445 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn1Q8K445 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn1Q8K445 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn1Q8K445 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Clrn1Q8K445 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn1Q8K445 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn1Q8K445 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn1Q8K445 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.91■□□□□ 0.46
Clrn1Q8K445 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn1Q8K445 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn1Q8K445 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Clrn1Q8K445 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn1Q8K445 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.9■□□□□ 0.46
Clrn1Q8K445 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn1Q8K445 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Clrn1Q8K445 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn1Q8K445 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Clrn1Q8K445 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.9■□□□□ 0.46
Clrn1Q8K445 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.9■□□□□ 0.46
Clrn1Q8K445 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn1Q8K445 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn1Q8K445 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn1Q8K445 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn1Q8K445 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn1Q8K445 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.46
Clrn1Q8K445 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Clrn1Q8K445 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn1Q8K445 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn1Q8K445 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.89■□□□□ 0.45
Clrn1Q8K445 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn1Q8K445 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Clrn1Q8K445 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn1Q8K445 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn1Q8K445 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.89■□□□□ 0.45
Clrn1Q8K445 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn1Q8K445 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.89■□□□□ 0.45
Clrn1Q8K445 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Clrn1Q8K445 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn1Q8K445 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Clrn1Q8K445 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Clrn1Q8K445 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Clrn1Q8K445 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.88■□□□□ 0.45
Clrn1Q8K445 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms