Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Iqck-206ENSMUST00000208658 2891 ntBASIC19.76■□□□□ 0.75
Prpf39Q8K2Z2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prpf39Q8K2Z2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf39Q8K2Z2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf39Q8K2Z2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf39Q8K2Z2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Prpf39Q8K2Z2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.75■□□□□ 0.75
Prpf39Q8K2Z2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.75■□□□□ 0.75
Prpf39Q8K2Z2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf39Q8K2Z2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.75■□□□□ 0.75
Prpf39Q8K2Z2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf39Q8K2Z2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf39Q8K2Z2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prpf39Q8K2Z2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Prpf39Q8K2Z2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf39Q8K2Z2 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.74■□□□□ 0.75
Prpf39Q8K2Z2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Prpf39Q8K2Z2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf39Q8K2Z2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.74■□□□□ 0.75
Prpf39Q8K2Z2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.74■□□□□ 0.75
Prpf39Q8K2Z2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf39Q8K2Z2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Prpf39Q8K2Z2 Gm9988-201ENSMUST00000069786 435 ntBASIC19.74■□□□□ 0.75
Prpf39Q8K2Z2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf39Q8K2Z2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.74■□□□□ 0.75
Prpf39Q8K2Z2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf39Q8K2Z2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf39Q8K2Z2 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.74■□□□□ 0.75
Prpf39Q8K2Z2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf39Q8K2Z2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prpf39Q8K2Z2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf39Q8K2Z2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf39Q8K2Z2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf39Q8K2Z2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf39Q8K2Z2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf39Q8K2Z2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Prpf39Q8K2Z2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prpf39Q8K2Z2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf39Q8K2Z2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf39Q8K2Z2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf39Q8K2Z2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf39Q8K2Z2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Prpf39Q8K2Z2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf39Q8K2Z2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.72■□□□□ 0.75
Prpf39Q8K2Z2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.72■□□□□ 0.75
Prpf39Q8K2Z2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.72■□□□□ 0.75
Prpf39Q8K2Z2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Prpf39Q8K2Z2 Gm38205-201ENSMUST00000192243 258 ntBASIC19.72■□□□□ 0.75
Prpf39Q8K2Z2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.72■□□□□ 0.75
Prpf39Q8K2Z2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.72■□□□□ 0.75
Prpf39Q8K2Z2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf39Q8K2Z2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf39Q8K2Z2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf39Q8K2Z2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf39Q8K2Z2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf39Q8K2Z2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prpf39Q8K2Z2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf39Q8K2Z2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Prpf39Q8K2Z2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Prpf39Q8K2Z2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf39Q8K2Z2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf39Q8K2Z2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf39Q8K2Z2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf39Q8K2Z2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf39Q8K2Z2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prpf39Q8K2Z2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf39Q8K2Z2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf39Q8K2Z2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf39Q8K2Z2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf39Q8K2Z2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf39Q8K2Z2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf39Q8K2Z2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf39Q8K2Z2 Gm10493-201ENSMUST00000097270 612 ntBASIC19.7■□□□□ 0.74
Prpf39Q8K2Z2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf39Q8K2Z2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Prpf39Q8K2Z2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf39Q8K2Z2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf39Q8K2Z2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Prpf39Q8K2Z2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.7■□□□□ 0.74
Prpf39Q8K2Z2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf39Q8K2Z2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf39Q8K2Z2 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.69■□□□□ 0.74
Prpf39Q8K2Z2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Prpf39Q8K2Z2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.69■□□□□ 0.74
Prpf39Q8K2Z2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf39Q8K2Z2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.69■□□□□ 0.74
Prpf39Q8K2Z2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf39Q8K2Z2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.69■□□□□ 0.74
Prpf39Q8K2Z2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf39Q8K2Z2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.69■□□□□ 0.74
Prpf39Q8K2Z2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf39Q8K2Z2 Reep4-203ENSMUST00000226563 1444 ntBASIC19.68■□□□□ 0.74
Prpf39Q8K2Z2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf39Q8K2Z2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf39Q8K2Z2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf39Q8K2Z2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.68■□□□□ 0.74
Prpf39Q8K2Z2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf39Q8K2Z2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf39Q8K2Z2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.68■□□□□ 0.74
Prpf39Q8K2Z2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms