Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim5Q8CI51 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim5Q8CI51 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim5Q8CI51 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.51■□□□□ 0.39
Pdlim5Q8CI51 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim5Q8CI51 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.51■□□□□ 0.39
Pdlim5Q8CI51 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim5Q8CI51 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim5Q8CI51 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim5Q8CI51 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim5Q8CI51 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pdlim5Q8CI51 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.5■□□□□ 0.39
Pdlim5Q8CI51 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim5Q8CI51 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pdlim5Q8CI51 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim5Q8CI51 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim5Q8CI51 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.5■□□□□ 0.39
Pdlim5Q8CI51 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.5■□□□□ 0.39
Pdlim5Q8CI51 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim5Q8CI51 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.5■□□□□ 0.39
Pdlim5Q8CI51 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.5■□□□□ 0.39
Pdlim5Q8CI51 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim5Q8CI51 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.5■□□□□ 0.39
Pdlim5Q8CI51 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pdlim5Q8CI51 Grk6-206ENSMUST00000224995 2971 ntBASIC17.49■□□□□ 0.39
Pdlim5Q8CI51 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim5Q8CI51 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim5Q8CI51 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim5Q8CI51 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.49■□□□□ 0.39
Pdlim5Q8CI51 Mir7075-201ENSMUST00000184187 82 ntBASIC17.49■□□□□ 0.39
Pdlim5Q8CI51 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim5Q8CI51 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim5Q8CI51 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim5Q8CI51 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.49■□□□□ 0.39
Pdlim5Q8CI51 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pdlim5Q8CI51 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pdlim5Q8CI51 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.49■□□□□ 0.39
Pdlim5Q8CI51 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 Gm12821-201ENSMUST00000120022 600 ntBASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pdlim5Q8CI51 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim5Q8CI51 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim5Q8CI51 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim5Q8CI51 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pdlim5Q8CI51 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pdlim5Q8CI51 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pdlim5Q8CI51 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim5Q8CI51 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.46■□□□□ 0.39
Pdlim5Q8CI51 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim5Q8CI51 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim5Q8CI51 Smad6-203ENSMUST00000179458 273 ntBASIC17.46■□□□□ 0.39
Pdlim5Q8CI51 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Pdlim5Q8CI51 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pdlim5Q8CI51 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pdlim5Q8CI51 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim5Q8CI51 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim5Q8CI51 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim5Q8CI51 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim5Q8CI51 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim5Q8CI51 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms