Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Gm10175-202ENSMUST00000208752 441 ntBASIC20.12■□□□□ 0.81
Rp1l1Q8CGM2 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.12■□□□□ 0.81
Rp1l1Q8CGM2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rp1l1Q8CGM2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rp1l1Q8CGM2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rp1l1Q8CGM2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rp1l1Q8CGM2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rp1l1Q8CGM2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rp1l1Q8CGM2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rp1l1Q8CGM2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.11■□□□□ 0.81
Rp1l1Q8CGM2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rp1l1Q8CGM2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.11■□□□□ 0.81
Rp1l1Q8CGM2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rp1l1Q8CGM2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Rp1l1Q8CGM2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rp1l1Q8CGM2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rp1l1Q8CGM2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rp1l1Q8CGM2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rp1l1Q8CGM2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rp1l1Q8CGM2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rp1l1Q8CGM2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rp1l1Q8CGM2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.11■□□□□ 0.81
Rp1l1Q8CGM2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rp1l1Q8CGM2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rp1l1Q8CGM2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rp1l1Q8CGM2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rp1l1Q8CGM2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.1■□□□□ 0.81
Rp1l1Q8CGM2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rp1l1Q8CGM2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.1■□□□□ 0.81
Rp1l1Q8CGM2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rp1l1Q8CGM2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rp1l1Q8CGM2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rp1l1Q8CGM2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rp1l1Q8CGM2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rp1l1Q8CGM2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rp1l1Q8CGM2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rp1l1Q8CGM2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rp1l1Q8CGM2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.09■□□□□ 0.81
Rp1l1Q8CGM2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.09■□□□□ 0.81
Rp1l1Q8CGM2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rp1l1Q8CGM2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rp1l1Q8CGM2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rp1l1Q8CGM2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Rp1l1Q8CGM2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rp1l1Q8CGM2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rp1l1Q8CGM2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Rp1l1Q8CGM2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rp1l1Q8CGM2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rp1l1Q8CGM2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rp1l1Q8CGM2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.09■□□□□ 0.81
Rp1l1Q8CGM2 Gm10819-201ENSMUST00000099988 561 ntBASIC20.09■□□□□ 0.81
Rp1l1Q8CGM2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rp1l1Q8CGM2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rp1l1Q8CGM2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rp1l1Q8CGM2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rp1l1Q8CGM2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.08■□□□□ 0.81
Rp1l1Q8CGM2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rp1l1Q8CGM2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rp1l1Q8CGM2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rp1l1Q8CGM2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rp1l1Q8CGM2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rp1l1Q8CGM2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rp1l1Q8CGM2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Rp1l1Q8CGM2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.07■□□□□ 0.8
Rp1l1Q8CGM2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rp1l1Q8CGM2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rp1l1Q8CGM2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rp1l1Q8CGM2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rp1l1Q8CGM2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rp1l1Q8CGM2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rp1l1Q8CGM2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rp1l1Q8CGM2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.07■□□□□ 0.8
Rp1l1Q8CGM2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rp1l1Q8CGM2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rp1l1Q8CGM2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rp1l1Q8CGM2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rp1l1Q8CGM2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.06■□□□□ 0.8
Rp1l1Q8CGM2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.06■□□□□ 0.8
Rp1l1Q8CGM2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.06■□□□□ 0.8
Rp1l1Q8CGM2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rp1l1Q8CGM2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rp1l1Q8CGM2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rp1l1Q8CGM2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rp1l1Q8CGM2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rp1l1Q8CGM2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rp1l1Q8CGM2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rp1l1Q8CGM2 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.05■□□□□ 0.8
Rp1l1Q8CGM2 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.05■□□□□ 0.8
Rp1l1Q8CGM2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rp1l1Q8CGM2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rp1l1Q8CGM2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rp1l1Q8CGM2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rp1l1Q8CGM2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rp1l1Q8CGM2 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.05■□□□□ 0.8
Rp1l1Q8CGM2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rp1l1Q8CGM2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rp1l1Q8CGM2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rp1l1Q8CGM2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rp1l1Q8CGM2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.04■□□□□ 0.8
Rp1l1Q8CGM2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms