Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
Usp44Q8C2S0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Usp44Q8C2S0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Usp44Q8C2S0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Usp44Q8C2S0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Usp44Q8C2S0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Usp44Q8C2S0 Gm13234-201ENSMUST00000120010 747 ntBASIC22.41■■□□□ 1.18
Usp44Q8C2S0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Usp44Q8C2S0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Usp44Q8C2S0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.41■■□□□ 1.18
Usp44Q8C2S0 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.41■■□□□ 1.18
Usp44Q8C2S0 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.41■■□□□ 1.18
Usp44Q8C2S0 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.41■■□□□ 1.18
Usp44Q8C2S0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Usp44Q8C2S0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Usp44Q8C2S0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Usp44Q8C2S0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Usp44Q8C2S0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Usp44Q8C2S0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Usp44Q8C2S0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Usp44Q8C2S0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Usp44Q8C2S0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Usp44Q8C2S0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.4■■□□□ 1.18
Usp44Q8C2S0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Usp44Q8C2S0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Usp44Q8C2S0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC22.4■■□□□ 1.18
Usp44Q8C2S0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Usp44Q8C2S0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Usp44Q8C2S0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Usp44Q8C2S0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Usp44Q8C2S0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Usp44Q8C2S0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.39■■□□□ 1.17
Usp44Q8C2S0 Gm18284-201ENSMUST00000172604 624 ntBASIC22.39■■□□□ 1.17
Usp44Q8C2S0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Usp44Q8C2S0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Usp44Q8C2S0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Usp44Q8C2S0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Usp44Q8C2S0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Usp44Q8C2S0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Usp44Q8C2S0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Usp44Q8C2S0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Usp44Q8C2S0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Usp44Q8C2S0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC22.38■■□□□ 1.17
Usp44Q8C2S0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Usp44Q8C2S0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Usp44Q8C2S0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Usp44Q8C2S0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Usp44Q8C2S0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Usp44Q8C2S0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Usp44Q8C2S0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Usp44Q8C2S0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Usp44Q8C2S0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Usp44Q8C2S0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Usp44Q8C2S0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Usp44Q8C2S0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Usp44Q8C2S0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Usp44Q8C2S0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Usp44Q8C2S0 Gm15039-201ENSMUST00000118914 875 ntBASIC22.36■■□□□ 1.17
Usp44Q8C2S0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.36■■□□□ 1.17
Usp44Q8C2S0 Gm10033-202ENSMUST00000211874 928 ntBASIC22.36■■□□□ 1.17
Usp44Q8C2S0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Usp44Q8C2S0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Usp44Q8C2S0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Usp44Q8C2S0 Gm5874-201ENSMUST00000096101 508 ntBASIC22.36■■□□□ 1.17
Usp44Q8C2S0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Usp44Q8C2S0 BC021767-201ENSMUST00000126387 1716 ntBASIC22.36■■□□□ 1.17
Usp44Q8C2S0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Usp44Q8C2S0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Usp44Q8C2S0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Usp44Q8C2S0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC22.35■■□□□ 1.17
Usp44Q8C2S0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Usp44Q8C2S0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Usp44Q8C2S0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Usp44Q8C2S0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Usp44Q8C2S0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Usp44Q8C2S0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
Usp44Q8C2S0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Usp44Q8C2S0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Usp44Q8C2S0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Usp44Q8C2S0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Usp44Q8C2S0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Usp44Q8C2S0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
Usp44Q8C2S0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Usp44Q8C2S0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Usp44Q8C2S0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Usp44Q8C2S0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Usp44Q8C2S0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Usp44Q8C2S0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Usp44Q8C2S0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Usp44Q8C2S0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Usp44Q8C2S0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Usp44Q8C2S0 Gm13534-201ENSMUST00000121169 513 ntBASIC22.34■■□□□ 1.17
Usp44Q8C2S0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.34■■□□□ 1.17
Usp44Q8C2S0 Gm5784-201ENSMUST00000179344 2478 ntBASIC22.33■■□□□ 1.17
Usp44Q8C2S0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Usp44Q8C2S0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Usp44Q8C2S0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Usp44Q8C2S0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.33■■□□□ 1.17
Usp44Q8C2S0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC22.33■■□□□ 1.17
Usp44Q8C2S0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms