Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atg4bQ8BGE6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atg4bQ8BGE6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atg4bQ8BGE6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atg4bQ8BGE6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.93■□□□□ 0.46
Atg4bQ8BGE6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Atg4bQ8BGE6 Gm7860-201ENSMUST00000121190 879 ntBASIC17.93■□□□□ 0.46
Atg4bQ8BGE6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atg4bQ8BGE6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atg4bQ8BGE6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Atg4bQ8BGE6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atg4bQ8BGE6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atg4bQ8BGE6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atg4bQ8BGE6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atg4bQ8BGE6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.91■□□□□ 0.46
Atg4bQ8BGE6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atg4bQ8BGE6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atg4bQ8BGE6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atg4bQ8BGE6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Atg4bQ8BGE6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Atg4bQ8BGE6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atg4bQ8BGE6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.91■□□□□ 0.46
Atg4bQ8BGE6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.91■□□□□ 0.46
Atg4bQ8BGE6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atg4bQ8BGE6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atg4bQ8BGE6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atg4bQ8BGE6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atg4bQ8BGE6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atg4bQ8BGE6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atg4bQ8BGE6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Atg4bQ8BGE6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atg4bQ8BGE6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Atg4bQ8BGE6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atg4bQ8BGE6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Atg4bQ8BGE6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Atg4bQ8BGE6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.9■□□□□ 0.46
Atg4bQ8BGE6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.9■□□□□ 0.46
Atg4bQ8BGE6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atg4bQ8BGE6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Atg4bQ8BGE6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atg4bQ8BGE6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Atg4bQ8BGE6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atg4bQ8BGE6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atg4bQ8BGE6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Atg4bQ8BGE6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atg4bQ8BGE6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Atg4bQ8BGE6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.89■□□□□ 0.45
Atg4bQ8BGE6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atg4bQ8BGE6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atg4bQ8BGE6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atg4bQ8BGE6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atg4bQ8BGE6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atg4bQ8BGE6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.89■□□□□ 0.45
Atg4bQ8BGE6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.89■□□□□ 0.45
Atg4bQ8BGE6 Gm38205-201ENSMUST00000192243 258 ntBASIC17.89■□□□□ 0.45
Atg4bQ8BGE6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.89■□□□□ 0.45
Atg4bQ8BGE6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Atg4bQ8BGE6 Gm9988-201ENSMUST00000069786 435 ntBASIC17.89■□□□□ 0.45
Atg4bQ8BGE6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atg4bQ8BGE6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Atg4bQ8BGE6 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.89■□□□□ 0.45
Atg4bQ8BGE6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atg4bQ8BGE6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.89■□□□□ 0.45
Atg4bQ8BGE6 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Atg4bQ8BGE6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Atg4bQ8BGE6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atg4bQ8BGE6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atg4bQ8BGE6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atg4bQ8BGE6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Atg4bQ8BGE6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Atg4bQ8BGE6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.88■□□□□ 0.45
Atg4bQ8BGE6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Atg4bQ8BGE6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Atg4bQ8BGE6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atg4bQ8BGE6 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.88■□□□□ 0.45
Atg4bQ8BGE6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Atg4bQ8BGE6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.88■□□□□ 0.45
Atg4bQ8BGE6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Atg4bQ8BGE6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Atg4bQ8BGE6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms