Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atpaf1Q811I0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Atpaf1Q811I0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atpaf1Q811I0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Atpaf1Q811I0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atpaf1Q811I0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atpaf1Q811I0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atpaf1Q811I0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atpaf1Q811I0 Fst-202ENSMUST00000223640 2612 ntBASIC15.57■□□□□ 0.08
Atpaf1Q811I0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atpaf1Q811I0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atpaf1Q811I0 Gm14523-201ENSMUST00000117260 558 ntBASIC15.57■□□□□ 0.08
Atpaf1Q811I0 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.57■□□□□ 0.08
Atpaf1Q811I0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.57■□□□□ 0.08
Atpaf1Q811I0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Atpaf1Q811I0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Atpaf1Q811I0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atpaf1Q811I0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atpaf1Q811I0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atpaf1Q811I0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Atpaf1Q811I0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atpaf1Q811I0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atpaf1Q811I0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Atpaf1Q811I0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Atpaf1Q811I0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atpaf1Q811I0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Atpaf1Q811I0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atpaf1Q811I0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Atpaf1Q811I0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.56■□□□□ 0.08
Atpaf1Q811I0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Atpaf1Q811I0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atpaf1Q811I0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atpaf1Q811I0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atpaf1Q811I0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atpaf1Q811I0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atpaf1Q811I0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atpaf1Q811I0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atpaf1Q811I0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Atpaf1Q811I0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Atpaf1Q811I0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Atpaf1Q811I0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Atpaf1Q811I0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Atpaf1Q811I0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Atpaf1Q811I0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Atpaf1Q811I0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Atpaf1Q811I0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Atpaf1Q811I0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Atpaf1Q811I0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Atpaf1Q811I0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Atpaf1Q811I0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Atpaf1Q811I0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Atpaf1Q811I0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Atpaf1Q811I0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Atpaf1Q811I0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Atpaf1Q811I0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atpaf1Q811I0 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.53■□□□□ 0.08
Atpaf1Q811I0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atpaf1Q811I0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Atpaf1Q811I0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atpaf1Q811I0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atpaf1Q811I0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Atpaf1Q811I0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atpaf1Q811I0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.53■□□□□ 0.08
Atpaf1Q811I0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atpaf1Q811I0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atpaf1Q811I0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Atpaf1Q811I0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Atpaf1Q811I0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Atpaf1Q811I0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Atpaf1Q811I0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.53■□□□□ 0.08
Atpaf1Q811I0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Atpaf1Q811I0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Atpaf1Q811I0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Atpaf1Q811I0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Atpaf1Q811I0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.52■□□□□ 0.08
Atpaf1Q811I0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC15.52■□□□□ 0.08
Atpaf1Q811I0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Atpaf1Q811I0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Atpaf1Q811I0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Atpaf1Q811I0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Atpaf1Q811I0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Atpaf1Q811I0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Atpaf1Q811I0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Atpaf1Q811I0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Atpaf1Q811I0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Atpaf1Q811I0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.51■□□□□ 0.07
Atpaf1Q811I0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Atpaf1Q811I0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Atpaf1Q811I0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Atpaf1Q811I0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Atpaf1Q811I0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Atpaf1Q811I0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Atpaf1Q811I0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Atpaf1Q811I0 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.51■□□□□ 0.07
Atpaf1Q811I0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Atpaf1Q811I0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.51■□□□□ 0.07
Atpaf1Q811I0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Atpaf1Q811I0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Atpaf1Q811I0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atpaf1Q811I0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms