Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx4Q7TNK1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx4Q7TNK1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx4Q7TNK1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx4Q7TNK1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx4Q7TNK1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx4Q7TNK1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx4Q7TNK1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx4Q7TNK1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx4Q7TNK1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Rfx4Q7TNK1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx4Q7TNK1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx4Q7TNK1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Rfx4Q7TNK1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Rfx4Q7TNK1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx4Q7TNK1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx4Q7TNK1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.27■□□□□ 0.52
Rfx4Q7TNK1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Rfx4Q7TNK1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx4Q7TNK1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Rfx4Q7TNK1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rfx4Q7TNK1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rfx4Q7TNK1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx4Q7TNK1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.26■□□□□ 0.51
Rfx4Q7TNK1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx4Q7TNK1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx4Q7TNK1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx4Q7TNK1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.26■□□□□ 0.51
Rfx4Q7TNK1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx4Q7TNK1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.26■□□□□ 0.51
Rfx4Q7TNK1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx4Q7TNK1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx4Q7TNK1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx4Q7TNK1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx4Q7TNK1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx4Q7TNK1 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.26■□□□□ 0.51
Rfx4Q7TNK1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx4Q7TNK1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx4Q7TNK1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.26■□□□□ 0.51
Rfx4Q7TNK1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.26■□□□□ 0.51
Rfx4Q7TNK1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx4Q7TNK1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx4Q7TNK1 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.25■□□□□ 0.51
Rfx4Q7TNK1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx4Q7TNK1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx4Q7TNK1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx4Q7TNK1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.25■□□□□ 0.51
Rfx4Q7TNK1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.25■□□□□ 0.51
Rfx4Q7TNK1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rfx4Q7TNK1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx4Q7TNK1 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.25■□□□□ 0.51
Rfx4Q7TNK1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.25■□□□□ 0.51
Rfx4Q7TNK1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx4Q7TNK1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Rfx4Q7TNK1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx4Q7TNK1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx4Q7TNK1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx4Q7TNK1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx4Q7TNK1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx4Q7TNK1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx4Q7TNK1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx4Q7TNK1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx4Q7TNK1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx4Q7TNK1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx4Q7TNK1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.23■□□□□ 0.51
Rfx4Q7TNK1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx4Q7TNK1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx4Q7TNK1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx4Q7TNK1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx4Q7TNK1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx4Q7TNK1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx4Q7TNK1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx4Q7TNK1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx4Q7TNK1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx4Q7TNK1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx4Q7TNK1 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.23■□□□□ 0.51
Rfx4Q7TNK1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rfx4Q7TNK1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx4Q7TNK1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx4Q7TNK1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx4Q7TNK1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rfx4Q7TNK1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx4Q7TNK1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx4Q7TNK1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx4Q7TNK1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx4Q7TNK1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx4Q7TNK1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx4Q7TNK1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx4Q7TNK1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx4Q7TNK1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx4Q7TNK1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx4Q7TNK1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx4Q7TNK1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rfx4Q7TNK1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx4Q7TNK1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rfx4Q7TNK1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx4Q7TNK1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx4Q7TNK1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.21■□□□□ 0.51
Rfx4Q7TNK1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rfx4Q7TNK1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms