Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf139Q7TMV1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf139Q7TMV1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf139Q7TMV1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf139Q7TMV1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf139Q7TMV1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf139Q7TMV1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf139Q7TMV1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf139Q7TMV1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf139Q7TMV1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf139Q7TMV1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf139Q7TMV1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf139Q7TMV1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rnf139Q7TMV1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf139Q7TMV1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf139Q7TMV1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf139Q7TMV1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf139Q7TMV1 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.4■□□□□ 0.86
Rnf139Q7TMV1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.4■□□□□ 0.86
Rnf139Q7TMV1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf139Q7TMV1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf139Q7TMV1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.4■□□□□ 0.86
Rnf139Q7TMV1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf139Q7TMV1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf139Q7TMV1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Rnf139Q7TMV1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.39■□□□□ 0.85
Rnf139Q7TMV1 Gm13234-201ENSMUST00000120010 747 ntBASIC20.39■□□□□ 0.85
Rnf139Q7TMV1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf139Q7TMV1 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.39■□□□□ 0.85
Rnf139Q7TMV1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rnf139Q7TMV1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
Rnf139Q7TMV1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf139Q7TMV1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Rnf139Q7TMV1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf139Q7TMV1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.38■□□□□ 0.85
Rnf139Q7TMV1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.38■□□□□ 0.85
Rnf139Q7TMV1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.38■□□□□ 0.85
Rnf139Q7TMV1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf139Q7TMV1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf139Q7TMV1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf139Q7TMV1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf139Q7TMV1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf139Q7TMV1 Gm42778-201ENSMUST00000199644 553 ntBASIC20.37■□□□□ 0.85
Rnf139Q7TMV1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.37■□□□□ 0.85
Rnf139Q7TMV1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf139Q7TMV1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf139Q7TMV1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf139Q7TMV1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf139Q7TMV1 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.37■□□□□ 0.85
Rnf139Q7TMV1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rnf139Q7TMV1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf139Q7TMV1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf139Q7TMV1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf139Q7TMV1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf139Q7TMV1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf139Q7TMV1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf139Q7TMV1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.36■□□□□ 0.85
Rnf139Q7TMV1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Rnf139Q7TMV1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf139Q7TMV1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf139Q7TMV1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf139Q7TMV1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf139Q7TMV1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf139Q7TMV1 Gm13146-201ENSMUST00000118508 780 ntBASIC20.35■□□□□ 0.85
Rnf139Q7TMV1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf139Q7TMV1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf139Q7TMV1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf139Q7TMV1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf139Q7TMV1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Rnf139Q7TMV1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf139Q7TMV1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf139Q7TMV1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Rnf139Q7TMV1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Rnf139Q7TMV1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf139Q7TMV1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.34■□□□□ 0.85
Rnf139Q7TMV1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf139Q7TMV1 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.34■□□□□ 0.85
Rnf139Q7TMV1 Gm10033-202ENSMUST00000211874 928 ntBASIC20.34■□□□□ 0.85
Rnf139Q7TMV1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf139Q7TMV1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf139Q7TMV1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf139Q7TMV1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf139Q7TMV1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Rnf139Q7TMV1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf139Q7TMV1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf139Q7TMV1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf139Q7TMV1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf139Q7TMV1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf139Q7TMV1 Gm42642-201ENSMUST00000200683 355 ntBASIC20.33■□□□□ 0.85
Rnf139Q7TMV1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf139Q7TMV1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf139Q7TMV1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rnf139Q7TMV1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf139Q7TMV1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf139Q7TMV1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf139Q7TMV1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf139Q7TMV1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rnf139Q7TMV1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf139Q7TMV1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf139Q7TMV1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms