Protein–RNA interactions for Protein: Q6QR59

Tcaf3, TRPM8 channel-associated factor 3, mousemouse

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf3Q6QR59 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tcaf3Q6QR59 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Tcaf3Q6QR59 Gm27275-201ENSMUST00000184318 272 ntBASIC20.9■□□□□ 0.94
Tcaf3Q6QR59 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tcaf3Q6QR59 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tcaf3Q6QR59 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.89■□□□□ 0.94
Tcaf3Q6QR59 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Tcaf3Q6QR59 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tcaf3Q6QR59 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Tcaf3Q6QR59 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tcaf3Q6QR59 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.89■□□□□ 0.93
Tcaf3Q6QR59 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.89■□□□□ 0.93
Tcaf3Q6QR59 Rab3c-203ENSMUST00000224180 967 ntBASIC20.89■□□□□ 0.93
Tcaf3Q6QR59 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tcaf3Q6QR59 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.88■□□□□ 0.93
Tcaf3Q6QR59 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tcaf3Q6QR59 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Tcaf3Q6QR59 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tcaf3Q6QR59 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tcaf3Q6QR59 Mir6982-201ENSMUST00000184354 68 ntBASIC20.88■□□□□ 0.93
Tcaf3Q6QR59 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tcaf3Q6QR59 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tcaf3Q6QR59 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tcaf3Q6QR59 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tcaf3Q6QR59 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tcaf3Q6QR59 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Tcaf3Q6QR59 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tcaf3Q6QR59 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tcaf3Q6QR59 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tcaf3Q6QR59 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.87■□□□□ 0.93
Tcaf3Q6QR59 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tcaf3Q6QR59 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.87■□□□□ 0.93
Tcaf3Q6QR59 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Tcaf3Q6QR59 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tcaf3Q6QR59 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tcaf3Q6QR59 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Tcaf3Q6QR59 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tcaf3Q6QR59 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Tcaf3Q6QR59 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.86■□□□□ 0.93
Tcaf3Q6QR59 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Tcaf3Q6QR59 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Tcaf3Q6QR59 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Tcaf3Q6QR59 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tcaf3Q6QR59 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tcaf3Q6QR59 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.85■□□□□ 0.93
Tcaf3Q6QR59 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.85■□□□□ 0.93
Tcaf3Q6QR59 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tcaf3Q6QR59 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tcaf3Q6QR59 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Tcaf3Q6QR59 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Tcaf3Q6QR59 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.85■□□□□ 0.93
Tcaf3Q6QR59 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tcaf3Q6QR59 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.85■□□□□ 0.93
Tcaf3Q6QR59 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tcaf3Q6QR59 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tcaf3Q6QR59 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Tcaf3Q6QR59 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tcaf3Q6QR59 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.84■□□□□ 0.93
Tcaf3Q6QR59 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Tcaf3Q6QR59 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tcaf3Q6QR59 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tcaf3Q6QR59 Gm12896-201ENSMUST00000118430 226 ntBASIC20.84■□□□□ 0.93
Tcaf3Q6QR59 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tcaf3Q6QR59 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.84■□□□□ 0.93
Tcaf3Q6QR59 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Tcaf3Q6QR59 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Tcaf3Q6QR59 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Tcaf3Q6QR59 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tcaf3Q6QR59 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tcaf3Q6QR59 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tcaf3Q6QR59 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tcaf3Q6QR59 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.83■□□□□ 0.93
Tcaf3Q6QR59 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tcaf3Q6QR59 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tcaf3Q6QR59 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tcaf3Q6QR59 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
Tcaf3Q6QR59 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tcaf3Q6QR59 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tcaf3Q6QR59 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tcaf3Q6QR59 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tcaf3Q6QR59 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tcaf3Q6QR59 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.82■□□□□ 0.92
Tcaf3Q6QR59 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Tcaf3Q6QR59 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tcaf3Q6QR59 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tcaf3Q6QR59 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Tcaf3Q6QR59 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tcaf3Q6QR59 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tcaf3Q6QR59 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tcaf3Q6QR59 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tcaf3Q6QR59 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tcaf3Q6QR59 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tcaf3Q6QR59 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tcaf3Q6QR59 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.81■□□□□ 0.92
Tcaf3Q6QR59 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Tcaf3Q6QR59 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tcaf3Q6QR59 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
Tcaf3Q6QR59 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Tcaf3Q6QR59 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Tcaf3Q6QR59 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms