Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Sdc3Q64519 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.24■□□□□ 0.51
Sdc3Q64519 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.24■□□□□ 0.51
Sdc3Q64519 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Sdc3Q64519 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Sdc3Q64519 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sdc3Q64519 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
Sdc3Q64519 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Sdc3Q64519 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.23■□□□□ 0.51
Sdc3Q64519 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Sdc3Q64519 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.23■□□□□ 0.51
Sdc3Q64519 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdc3Q64519 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Sdc3Q64519 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdc3Q64519 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdc3Q64519 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.23■□□□□ 0.51
Sdc3Q64519 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sdc3Q64519 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sdc3Q64519 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.23■□□□□ 0.51
Sdc3Q64519 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdc3Q64519 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdc3Q64519 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.23■□□□□ 0.51
Sdc3Q64519 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sdc3Q64519 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdc3Q64519 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdc3Q64519 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdc3Q64519 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc3Q64519 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc3Q64519 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc3Q64519 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc3Q64519 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc3Q64519 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc3Q64519 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc3Q64519 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc3Q64519 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc3Q64519 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc3Q64519 Gm38205-201ENSMUST00000192243 258 ntBASIC18.22■□□□□ 0.51
Sdc3Q64519 Gm37179-201ENSMUST00000194862 823 ntBASIC18.22■□□□□ 0.51
Sdc3Q64519 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc3Q64519 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Sdc3Q64519 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc3Q64519 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Sdc3Q64519 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc3Q64519 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc3Q64519 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sdc3Q64519 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc3Q64519 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc3Q64519 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc3Q64519 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Sdc3Q64519 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc3Q64519 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc3Q64519 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sdc3Q64519 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Sdc3Q64519 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc3Q64519 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.21■□□□□ 0.5
Sdc3Q64519 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc3Q64519 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sdc3Q64519 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc3Q64519 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sdc3Q64519 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.2■□□□□ 0.5
Sdc3Q64519 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.2■□□□□ 0.5
Sdc3Q64519 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc3Q64519 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc3Q64519 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc3Q64519 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc3Q64519 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.2■□□□□ 0.5
Sdc3Q64519 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc3Q64519 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc3Q64519 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc3Q64519 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc3Q64519 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc3Q64519 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc3Q64519 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sdc3Q64519 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.19■□□□□ 0.5
Sdc3Q64519 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.19■□□□□ 0.5
Sdc3Q64519 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.19■□□□□ 0.5
Sdc3Q64519 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.19■□□□□ 0.5
Sdc3Q64519 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.19■□□□□ 0.5
Sdc3Q64519 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc3Q64519 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc3Q64519 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc3Q64519 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc3Q64519 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.19■□□□□ 0.5
Sdc3Q64519 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sdc3Q64519 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.19■□□□□ 0.5
Sdc3Q64519 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc3Q64519 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc3Q64519 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc3Q64519 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc3Q64519 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc3Q64519 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.18■□□□□ 0.5
Sdc3Q64519 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.18■□□□□ 0.5
Sdc3Q64519 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc3Q64519 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc3Q64519 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc3Q64519 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc3Q64519 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sdc3Q64519 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc3Q64519 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdc3Q64519 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms