Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
Rai1Q61818 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rai1Q61818 Gm2559-201ENSMUST00000201323 363 ntBASIC18.56■□□□□ 0.56
Rai1Q61818 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rai1Q61818 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rai1Q61818 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rai1Q61818 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rai1Q61818 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rai1Q61818 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rai1Q61818 Gm22325-201ENSMUST00000158904 308 ntBASIC18.55■□□□□ 0.56
Rai1Q61818 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.55■□□□□ 0.56
Rai1Q61818 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.54■□□□□ 0.56
Rai1Q61818 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rai1Q61818 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rai1Q61818 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rai1Q61818 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rai1Q61818 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.54■□□□□ 0.56
Rai1Q61818 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.54■□□□□ 0.56
Rai1Q61818 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rai1Q61818 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rai1Q61818 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rai1Q61818 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rai1Q61818 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rai1Q61818 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rai1Q61818 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rai1Q61818 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rai1Q61818 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rai1Q61818 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rai1Q61818 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.53■□□□□ 0.56
Rai1Q61818 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.53■□□□□ 0.56
Rai1Q61818 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rai1Q61818 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rai1Q61818 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rai1Q61818 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rai1Q61818 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rai1Q61818 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rai1Q61818 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.52■□□□□ 0.56
Rai1Q61818 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rai1Q61818 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rai1Q61818 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rai1Q61818 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rai1Q61818 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rai1Q61818 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rai1Q61818 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rai1Q61818 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rai1Q61818 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rai1Q61818 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.52■□□□□ 0.55
Rai1Q61818 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rai1Q61818 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rai1Q61818 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
Rai1Q61818 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rai1Q61818 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rai1Q61818 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rai1Q61818 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rai1Q61818 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rai1Q61818 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rai1Q61818 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rai1Q61818 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.51■□□□□ 0.55
Rai1Q61818 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rai1Q61818 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.51■□□□□ 0.55
Rai1Q61818 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rai1Q61818 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rai1Q61818 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rai1Q61818 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rai1Q61818 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.5■□□□□ 0.55
Rai1Q61818 Gm715-201ENSMUST00000117865 831 ntBASIC18.5■□□□□ 0.55
Rai1Q61818 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rai1Q61818 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rai1Q61818 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rai1Q61818 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rai1Q61818 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rai1Q61818 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rai1Q61818 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rai1Q61818 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rai1Q61818 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rai1Q61818 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rai1Q61818 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.49■□□□□ 0.55
Rai1Q61818 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rai1Q61818 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rai1Q61818 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rai1Q61818 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.48■□□□□ 0.55
Rai1Q61818 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Rai1Q61818 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rai1Q61818 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rai1Q61818 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.48■□□□□ 0.55
Rai1Q61818 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rai1Q61818 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rai1Q61818 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rai1Q61818 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rai1Q61818 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rai1Q61818 Gm13836-201ENSMUST00000121159 501 ntBASIC18.48■□□□□ 0.55
Rai1Q61818 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rai1Q61818 Gm10698-201ENSMUST00000182663 604 ntBASIC18.48■□□□□ 0.55
Rai1Q61818 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.48■□□□□ 0.55
Rai1Q61818 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rai1Q61818 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rai1Q61818 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rai1Q61818 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rai1Q61818 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Rai1Q61818 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms