Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trim38Q5SZ99 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim38Q5SZ99 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim38Q5SZ99 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim38Q5SZ99 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
Trim38Q5SZ99 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trim38Q5SZ99 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim38Q5SZ99 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.72■□□□□ 0.75
Trim38Q5SZ99 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim38Q5SZ99 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim38Q5SZ99 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim38Q5SZ99 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim38Q5SZ99 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim38Q5SZ99 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim38Q5SZ99 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim38Q5SZ99 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim38Q5SZ99 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim38Q5SZ99 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim38Q5SZ99 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim38Q5SZ99 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim38Q5SZ99 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trim38Q5SZ99 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim38Q5SZ99 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim38Q5SZ99 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim38Q5SZ99 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim38Q5SZ99 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim38Q5SZ99 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.71■□□□□ 0.75
Trim38Q5SZ99 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim38Q5SZ99 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trim38Q5SZ99 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trim38Q5SZ99 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim38Q5SZ99 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim38Q5SZ99 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim38Q5SZ99 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trim38Q5SZ99 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim38Q5SZ99 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.7■□□□□ 0.74
Trim38Q5SZ99 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.7■□□□□ 0.74
Trim38Q5SZ99 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim38Q5SZ99 Gm40848-201ENSMUST00000221998 324 ntBASIC19.7■□□□□ 0.74
Trim38Q5SZ99 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim38Q5SZ99 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim38Q5SZ99 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim38Q5SZ99 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim38Q5SZ99 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim38Q5SZ99 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim38Q5SZ99 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim38Q5SZ99 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trim38Q5SZ99 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim38Q5SZ99 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.69■□□□□ 0.74
Trim38Q5SZ99 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim38Q5SZ99 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim38Q5SZ99 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim38Q5SZ99 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim38Q5SZ99 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim38Q5SZ99 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim38Q5SZ99 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trim38Q5SZ99 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim38Q5SZ99 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim38Q5SZ99 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim38Q5SZ99 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Trim38Q5SZ99 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim38Q5SZ99 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim38Q5SZ99 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.68■□□□□ 0.74
Trim38Q5SZ99 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim38Q5SZ99 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trim38Q5SZ99 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim38Q5SZ99 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim38Q5SZ99 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim38Q5SZ99 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim38Q5SZ99 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim38Q5SZ99 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim38Q5SZ99 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim38Q5SZ99 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim38Q5SZ99 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Trim38Q5SZ99 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.67■□□□□ 0.74
Trim38Q5SZ99 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim38Q5SZ99 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trim38Q5SZ99 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.67■□□□□ 0.74
Trim38Q5SZ99 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.67■□□□□ 0.74
Trim38Q5SZ99 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim38Q5SZ99 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trim38Q5SZ99 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Trim38Q5SZ99 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim38Q5SZ99 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim38Q5SZ99 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim38Q5SZ99 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.66■□□□□ 0.74
Trim38Q5SZ99 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim38Q5SZ99 Gm7860-201ENSMUST00000121190 879 ntBASIC19.66■□□□□ 0.74
Trim38Q5SZ99 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim38Q5SZ99 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim38Q5SZ99 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Trim38Q5SZ99 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.66■□□□□ 0.74
Trim38Q5SZ99 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim38Q5SZ99 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim38Q5SZ99 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim38Q5SZ99 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim38Q5SZ99 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim38Q5SZ99 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Trim38Q5SZ99 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim38Q5SZ99 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms