Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scarf1Q5ND28 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Scarf1Q5ND28 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scarf1Q5ND28 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
Scarf1Q5ND28 Gm27405-201ENSMUST00000184201 112 ntBASIC20.9■□□□□ 0.94
Scarf1Q5ND28 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scarf1Q5ND28 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scarf1Q5ND28 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scarf1Q5ND28 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scarf1Q5ND28 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scarf1Q5ND28 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Scarf1Q5ND28 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Scarf1Q5ND28 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Scarf1Q5ND28 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Scarf1Q5ND28 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Scarf1Q5ND28 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scarf1Q5ND28 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Scarf1Q5ND28 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scarf1Q5ND28 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scarf1Q5ND28 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Scarf1Q5ND28 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Scarf1Q5ND28 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scarf1Q5ND28 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scarf1Q5ND28 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scarf1Q5ND28 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.88■□□□□ 0.93
Scarf1Q5ND28 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Scarf1Q5ND28 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scarf1Q5ND28 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scarf1Q5ND28 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
Scarf1Q5ND28 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scarf1Q5ND28 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.88■□□□□ 0.93
Scarf1Q5ND28 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Scarf1Q5ND28 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scarf1Q5ND28 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.87■□□□□ 0.93
Scarf1Q5ND28 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Scarf1Q5ND28 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.87■□□□□ 0.93
Scarf1Q5ND28 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scarf1Q5ND28 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scarf1Q5ND28 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Scarf1Q5ND28 Gm7291-201ENSMUST00000199147 382 ntBASIC20.87■□□□□ 0.93
Scarf1Q5ND28 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scarf1Q5ND28 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scarf1Q5ND28 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Scarf1Q5ND28 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.86■□□□□ 0.93
Scarf1Q5ND28 Gm7514-201ENSMUST00000209475 934 ntBASIC20.86■□□□□ 0.93
Scarf1Q5ND28 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Scarf1Q5ND28 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scarf1Q5ND28 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scarf1Q5ND28 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Scarf1Q5ND28 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scarf1Q5ND28 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scarf1Q5ND28 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scarf1Q5ND28 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scarf1Q5ND28 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.85■□□□□ 0.93
Scarf1Q5ND28 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Scarf1Q5ND28 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.85■□□□□ 0.93
Scarf1Q5ND28 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scarf1Q5ND28 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scarf1Q5ND28 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Scarf1Q5ND28 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scarf1Q5ND28 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scarf1Q5ND28 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scarf1Q5ND28 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scarf1Q5ND28 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.84■□□□□ 0.93
Scarf1Q5ND28 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scarf1Q5ND28 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scarf1Q5ND28 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scarf1Q5ND28 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scarf1Q5ND28 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scarf1Q5ND28 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scarf1Q5ND28 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scarf1Q5ND28 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scarf1Q5ND28 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scarf1Q5ND28 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scarf1Q5ND28 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Scarf1Q5ND28 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scarf1Q5ND28 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scarf1Q5ND28 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.83■□□□□ 0.93
Scarf1Q5ND28 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Scarf1Q5ND28 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.83■□□□□ 0.93
Scarf1Q5ND28 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.83■□□□□ 0.92
Scarf1Q5ND28 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scarf1Q5ND28 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scarf1Q5ND28 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scarf1Q5ND28 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scarf1Q5ND28 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Scarf1Q5ND28 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scarf1Q5ND28 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scarf1Q5ND28 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.82■□□□□ 0.92
Scarf1Q5ND28 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Scarf1Q5ND28 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.82■□□□□ 0.92
Scarf1Q5ND28 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Scarf1Q5ND28 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scarf1Q5ND28 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Scarf1Q5ND28 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scarf1Q5ND28 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scarf1Q5ND28 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scarf1Q5ND28 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scarf1Q5ND28 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Scarf1Q5ND28 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms