Protein–RNA interactions for Protein: Q4V339

CBWD6, COBW domain-containing protein 6, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6Q4V339 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CBWD6Q4V339 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CBWD6Q4V339 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CBWD6Q4V339 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CBWD6Q4V339 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CBWD6Q4V339 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.35■■□□□ 1.33
CBWD6Q4V339 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CBWD6Q4V339 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CBWD6Q4V339 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CBWD6Q4V339 SUDS3P1-201ENST00000505831 966 ntBASIC23.35■■□□□ 1.33
CBWD6Q4V339 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CBWD6Q4V339 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.35■■□□□ 1.33
CBWD6Q4V339 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CBWD6Q4V339 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CBWD6Q4V339 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CBWD6Q4V339 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
CBWD6Q4V339 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.34■■□□□ 1.33
CBWD6Q4V339 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.34■■□□□ 1.33
CBWD6Q4V339 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.34■■□□□ 1.33
CBWD6Q4V339 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CBWD6Q4V339 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CBWD6Q4V339 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CBWD6Q4V339 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CBWD6Q4V339 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.34■■□□□ 1.33
CBWD6Q4V339 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.34■■□□□ 1.33
CBWD6Q4V339 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.34■■□□□ 1.33
CBWD6Q4V339 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.34■■□□□ 1.33
CBWD6Q4V339 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CBWD6Q4V339 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CBWD6Q4V339 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CBWD6Q4V339 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CBWD6Q4V339 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.33■■□□□ 1.33
CBWD6Q4V339 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
CBWD6Q4V339 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.33■■□□□ 1.33
CBWD6Q4V339 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
CBWD6Q4V339 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CBWD6Q4V339 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.33■■□□□ 1.33
CBWD6Q4V339 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.33■■□□□ 1.33
CBWD6Q4V339 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.33■■□□□ 1.33
CBWD6Q4V339 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.33■■□□□ 1.32
CBWD6Q4V339 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.33■■□□□ 1.32
CBWD6Q4V339 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CBWD6Q4V339 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CBWD6Q4V339 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
CBWD6Q4V339 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.32■■□□□ 1.32
CBWD6Q4V339 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CBWD6Q4V339 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.32■■□□□ 1.32
CBWD6Q4V339 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CBWD6Q4V339 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.32■■□□□ 1.32
CBWD6Q4V339 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CBWD6Q4V339 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CBWD6Q4V339 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.32■■□□□ 1.32
CBWD6Q4V339 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
CBWD6Q4V339 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CBWD6Q4V339 RASA4CP-201ENST00000424092 1398 ntBASIC23.32■■□□□ 1.32
CBWD6Q4V339 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.32■■□□□ 1.32
CBWD6Q4V339 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CBWD6Q4V339 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CBWD6Q4V339 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CBWD6Q4V339 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CBWD6Q4V339 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.32■■□□□ 1.32
CBWD6Q4V339 TSPY26P-201ENST00000476365 1326 ntBASIC23.32■■□□□ 1.32
CBWD6Q4V339 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.31■■□□□ 1.32
CBWD6Q4V339 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CBWD6Q4V339 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.31■■□□□ 1.32
CBWD6Q4V339 AC091305.1-201ENST00000479476 895 ntBASIC23.31■■□□□ 1.32
CBWD6Q4V339 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.31■■□□□ 1.32
CBWD6Q4V339 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.31■■□□□ 1.32
CBWD6Q4V339 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
CBWD6Q4V339 SMUG1P1-201ENST00000590640 811 ntBASIC23.31■■□□□ 1.32
CBWD6Q4V339 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CBWD6Q4V339 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CBWD6Q4V339 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CBWD6Q4V339 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CBWD6Q4V339 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CBWD6Q4V339 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CBWD6Q4V339 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.3■■□□□ 1.32
CBWD6Q4V339 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.3■■□□□ 1.32
CBWD6Q4V339 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.3■■□□□ 1.32
CBWD6Q4V339 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CBWD6Q4V339 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.3■■□□□ 1.32
CBWD6Q4V339 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CBWD6Q4V339 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.29■■□□□ 1.32
CBWD6Q4V339 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CBWD6Q4V339 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CBWD6Q4V339 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CBWD6Q4V339 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.29■■□□□ 1.32
CBWD6Q4V339 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.29■■□□□ 1.32
CBWD6Q4V339 CLDN5-201ENST00000403084 2357 ntBASIC23.29■■□□□ 1.32
CBWD6Q4V339 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CBWD6Q4V339 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CBWD6Q4V339 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CBWD6Q4V339 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CBWD6Q4V339 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CBWD6Q4V339 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.28■■□□□ 1.32
CBWD6Q4V339 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
CBWD6Q4V339 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CBWD6Q4V339 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CBWD6Q4V339 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CBWD6Q4V339 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms