Protein–RNA interactions for Protein: Q3TFD2

Lpcat1, Lysophosphatidylcholine acyltransferase 1, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lpcat1Q3TFD2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lpcat1Q3TFD2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lpcat1Q3TFD2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lpcat1Q3TFD2 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.19■□□□□ 0.5
Lpcat1Q3TFD2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lpcat1Q3TFD2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lpcat1Q3TFD2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lpcat1Q3TFD2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Lpcat1Q3TFD2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lpcat1Q3TFD2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Lpcat1Q3TFD2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lpcat1Q3TFD2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lpcat1Q3TFD2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lpcat1Q3TFD2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Lpcat1Q3TFD2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lpcat1Q3TFD2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lpcat1Q3TFD2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lpcat1Q3TFD2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lpcat1Q3TFD2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lpcat1Q3TFD2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lpcat1Q3TFD2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lpcat1Q3TFD2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Lpcat1Q3TFD2 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.17■□□□□ 0.5
Lpcat1Q3TFD2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Lpcat1Q3TFD2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lpcat1Q3TFD2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.17■□□□□ 0.5
Lpcat1Q3TFD2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lpcat1Q3TFD2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lpcat1Q3TFD2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lpcat1Q3TFD2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lpcat1Q3TFD2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Lpcat1Q3TFD2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lpcat1Q3TFD2 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.17■□□□□ 0.5
Lpcat1Q3TFD2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lpcat1Q3TFD2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lpcat1Q3TFD2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lpcat1Q3TFD2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lpcat1Q3TFD2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lpcat1Q3TFD2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lpcat1Q3TFD2 Gm12922-201ENSMUST00000120626 809 ntBASIC18.16■□□□□ 0.5
Lpcat1Q3TFD2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.16■□□□□ 0.5
Lpcat1Q3TFD2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Lpcat1Q3TFD2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lpcat1Q3TFD2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lpcat1Q3TFD2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lpcat1Q3TFD2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lpcat1Q3TFD2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lpcat1Q3TFD2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Lpcat1Q3TFD2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lpcat1Q3TFD2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lpcat1Q3TFD2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lpcat1Q3TFD2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lpcat1Q3TFD2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lpcat1Q3TFD2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lpcat1Q3TFD2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Lpcat1Q3TFD2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lpcat1Q3TFD2 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.15■□□□□ 0.5
Lpcat1Q3TFD2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Lpcat1Q3TFD2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lpcat1Q3TFD2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lpcat1Q3TFD2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lpcat1Q3TFD2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Lpcat1Q3TFD2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lpcat1Q3TFD2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lpcat1Q3TFD2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lpcat1Q3TFD2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lpcat1Q3TFD2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Lpcat1Q3TFD2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lpcat1Q3TFD2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.14■□□□□ 0.49
Lpcat1Q3TFD2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.14■□□□□ 0.49
Lpcat1Q3TFD2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.14■□□□□ 0.49
Lpcat1Q3TFD2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lpcat1Q3TFD2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lpcat1Q3TFD2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lpcat1Q3TFD2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lpcat1Q3TFD2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lpcat1Q3TFD2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
Lpcat1Q3TFD2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.13■□□□□ 0.49
Lpcat1Q3TFD2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lpcat1Q3TFD2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lpcat1Q3TFD2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lpcat1Q3TFD2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lpcat1Q3TFD2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lpcat1Q3TFD2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.13■□□□□ 0.49
Lpcat1Q3TFD2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lpcat1Q3TFD2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Lpcat1Q3TFD2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lpcat1Q3TFD2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Lpcat1Q3TFD2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lpcat1Q3TFD2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lpcat1Q3TFD2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lpcat1Q3TFD2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.12■□□□□ 0.49
Lpcat1Q3TFD2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.12■□□□□ 0.49
Lpcat1Q3TFD2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
Lpcat1Q3TFD2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lpcat1Q3TFD2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lpcat1Q3TFD2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.12■□□□□ 0.49
Lpcat1Q3TFD2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lpcat1Q3TFD2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lpcat1Q3TFD2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms