Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim72Q1XH17 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim72Q1XH17 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim72Q1XH17 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim72Q1XH17 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim72Q1XH17 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trim72Q1XH17 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim72Q1XH17 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim72Q1XH17 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim72Q1XH17 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.3■□□□□ 0.84
Trim72Q1XH17 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim72Q1XH17 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim72Q1XH17 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim72Q1XH17 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Trim72Q1XH17 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim72Q1XH17 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim72Q1XH17 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim72Q1XH17 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim72Q1XH17 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim72Q1XH17 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim72Q1XH17 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim72Q1XH17 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim72Q1XH17 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim72Q1XH17 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim72Q1XH17 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.3■□□□□ 0.84
Trim72Q1XH17 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Trim72Q1XH17 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim72Q1XH17 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim72Q1XH17 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.29■□□□□ 0.84
Trim72Q1XH17 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim72Q1XH17 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim72Q1XH17 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim72Q1XH17 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim72Q1XH17 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Trim72Q1XH17 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim72Q1XH17 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim72Q1XH17 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim72Q1XH17 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim72Q1XH17 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim72Q1XH17 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim72Q1XH17 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim72Q1XH17 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.28■□□□□ 0.84
Trim72Q1XH17 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim72Q1XH17 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim72Q1XH17 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim72Q1XH17 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim72Q1XH17 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim72Q1XH17 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim72Q1XH17 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim72Q1XH17 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim72Q1XH17 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim72Q1XH17 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim72Q1XH17 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim72Q1XH17 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim72Q1XH17 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim72Q1XH17 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim72Q1XH17 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim72Q1XH17 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim72Q1XH17 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Trim72Q1XH17 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim72Q1XH17 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim72Q1XH17 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim72Q1XH17 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trim72Q1XH17 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim72Q1XH17 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Trim72Q1XH17 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.26■□□□□ 0.83
Trim72Q1XH17 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim72Q1XH17 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim72Q1XH17 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim72Q1XH17 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim72Q1XH17 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim72Q1XH17 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim72Q1XH17 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim72Q1XH17 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim72Q1XH17 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim72Q1XH17 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim72Q1XH17 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim72Q1XH17 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim72Q1XH17 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Trim72Q1XH17 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim72Q1XH17 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.25■□□□□ 0.83
Trim72Q1XH17 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim72Q1XH17 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim72Q1XH17 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trim72Q1XH17 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim72Q1XH17 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trim72Q1XH17 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim72Q1XH17 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim72Q1XH17 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim72Q1XH17 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim72Q1XH17 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Trim72Q1XH17 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim72Q1XH17 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.24■□□□□ 0.83
Trim72Q1XH17 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.24■□□□□ 0.83
Trim72Q1XH17 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim72Q1XH17 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Trim72Q1XH17 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim72Q1XH17 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim72Q1XH17 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim72Q1XH17 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms