Protein–RNA interactions for Protein: P97357

Taf1a, TATA box-binding protein-associated factor RNA polymerase I subunit A, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1aP97357 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Taf1aP97357 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Taf1aP97357 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Taf1aP97357 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Taf1aP97357 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Taf1aP97357 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Taf1aP97357 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Taf1aP97357 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Taf1aP97357 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Taf1aP97357 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Taf1aP97357 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Taf1aP97357 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Taf1aP97357 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Taf1aP97357 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Taf1aP97357 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.55■□□□□ 0.4
Taf1aP97357 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Taf1aP97357 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.55■□□□□ 0.4
Taf1aP97357 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.54■□□□□ 0.4
Taf1aP97357 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Taf1aP97357 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Taf1aP97357 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Taf1aP97357 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Taf1aP97357 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Taf1aP97357 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.54■□□□□ 0.4
Taf1aP97357 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Taf1aP97357 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.54■□□□□ 0.4
Taf1aP97357 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.54■□□□□ 0.4
Taf1aP97357 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Taf1aP97357 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Taf1aP97357 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Taf1aP97357 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.54■□□□□ 0.4
Taf1aP97357 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Taf1aP97357 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Taf1aP97357 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Taf1aP97357 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Taf1aP97357 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Taf1aP97357 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Taf1aP97357 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Taf1aP97357 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Taf1aP97357 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Taf1aP97357 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Taf1aP97357 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Taf1aP97357 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Taf1aP97357 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.52■□□□□ 0.4
Taf1aP97357 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Taf1aP97357 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Taf1aP97357 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Taf1aP97357 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Taf1aP97357 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.52■□□□□ 0.4
Taf1aP97357 Serp2-204ENSMUST00000228055 705 ntBASIC17.52■□□□□ 0.4
Taf1aP97357 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Taf1aP97357 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Taf1aP97357 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Taf1aP97357 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Taf1aP97357 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Taf1aP97357 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.52■□□□□ 0.39
Taf1aP97357 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Taf1aP97357 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Taf1aP97357 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Taf1aP97357 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Taf1aP97357 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Taf1aP97357 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Taf1aP97357 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.51■□□□□ 0.39
Taf1aP97357 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.51■□□□□ 0.39
Taf1aP97357 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Taf1aP97357 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Taf1aP97357 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Taf1aP97357 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Taf1aP97357 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Taf1aP97357 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Taf1aP97357 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Taf1aP97357 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Taf1aP97357 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Taf1aP97357 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.5■□□□□ 0.39
Taf1aP97357 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Taf1aP97357 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Taf1aP97357 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Taf1aP97357 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Taf1aP97357 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Taf1aP97357 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Taf1aP97357 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Taf1aP97357 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Taf1aP97357 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.49■□□□□ 0.39
Taf1aP97357 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Taf1aP97357 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Taf1aP97357 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.49■□□□□ 0.39
Taf1aP97357 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.49■□□□□ 0.39
Taf1aP97357 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.49■□□□□ 0.39
Taf1aP97357 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Taf1aP97357 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Taf1aP97357 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.49■□□□□ 0.39
Taf1aP97357 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Taf1aP97357 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Taf1aP97357 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Taf1aP97357 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Taf1aP97357 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Taf1aP97357 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Taf1aP97357 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Taf1aP97357 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
Taf1aP97357 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms