Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ldb1P70662 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ldb1P70662 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ldb1P70662 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ldb1P70662 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ldb1P70662 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ldb1P70662 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ldb1P70662 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.95■□□□□ 0.62
Ldb1P70662 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ldb1P70662 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ldb1P70662 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ldb1P70662 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ldb1P70662 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ldb1P70662 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ldb1P70662 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ldb1P70662 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ldb1P70662 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ldb1P70662 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ldb1P70662 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Ldb1P70662 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.94■□□□□ 0.62
Ldb1P70662 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ldb1P70662 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ldb1P70662 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ldb1P70662 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ldb1P70662 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ldb1P70662 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ldb1P70662 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ldb1P70662 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ldb1P70662 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ldb1P70662 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.93■□□□□ 0.62
Ldb1P70662 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ldb1P70662 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ldb1P70662 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Ldb1P70662 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ldb1P70662 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ldb1P70662 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ldb1P70662 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ldb1P70662 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ldb1P70662 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ldb1P70662 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ldb1P70662 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ldb1P70662 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb1P70662 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb1P70662 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb1P70662 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb1P70662 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb1P70662 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb1P70662 Gm27801-201ENSMUST00000184174 223 ntBASIC18.92■□□□□ 0.62
Ldb1P70662 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.92■□□□□ 0.62
Ldb1P70662 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.92■□□□□ 0.62
Ldb1P70662 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.92■□□□□ 0.62
Ldb1P70662 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb1P70662 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb1P70662 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb1P70662 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb1P70662 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb1P70662 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb1P70662 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb1P70662 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb1P70662 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Ldb1P70662 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ldb1P70662 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ldb1P70662 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ldb1P70662 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ldb1P70662 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ldb1P70662 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.91■□□□□ 0.62
Ldb1P70662 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ldb1P70662 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.91■□□□□ 0.62
Ldb1P70662 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.91■□□□□ 0.62
Ldb1P70662 Gm43060-201ENSMUST00000200621 289 ntBASIC18.91■□□□□ 0.62
Ldb1P70662 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.91■□□□□ 0.62
Ldb1P70662 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ldb1P70662 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ldb1P70662 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ldb1P70662 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ldb1P70662 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.91■□□□□ 0.62
Ldb1P70662 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ldb1P70662 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb1P70662 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb1P70662 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb1P70662 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb1P70662 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb1P70662 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb1P70662 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.9■□□□□ 0.62
Ldb1P70662 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb1P70662 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.9■□□□□ 0.62
Ldb1P70662 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb1P70662 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb1P70662 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb1P70662 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb1P70662 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb1P70662 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb1P70662 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ldb1P70662 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Ldb1P70662 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ldb1P70662 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.89■□□□□ 0.61
Ldb1P70662 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Ldb1P70662 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.89■□□□□ 0.61
Ldb1P70662 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ldb1P70662 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms