Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Crnkl1P63154 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Crnkl1P63154 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Crnkl1P63154 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Crnkl1P63154 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Crnkl1P63154 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Crnkl1P63154 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.78■□□□□ 0.6
Crnkl1P63154 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Crnkl1P63154 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Crnkl1P63154 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Crnkl1P63154 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Crnkl1P63154 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Crnkl1P63154 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.78■□□□□ 0.6
Crnkl1P63154 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Crnkl1P63154 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Crnkl1P63154 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Crnkl1P63154 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Crnkl1P63154 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Crnkl1P63154 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.78■□□□□ 0.6
Crnkl1P63154 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Crnkl1P63154 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Crnkl1P63154 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Crnkl1P63154 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.77■□□□□ 0.6
Crnkl1P63154 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Crnkl1P63154 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Crnkl1P63154 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Crnkl1P63154 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Crnkl1P63154 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Crnkl1P63154 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Crnkl1P63154 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.77■□□□□ 0.6
Crnkl1P63154 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.77■□□□□ 0.6
Crnkl1P63154 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Crnkl1P63154 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Crnkl1P63154 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Crnkl1P63154 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Crnkl1P63154 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Crnkl1P63154 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Crnkl1P63154 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Crnkl1P63154 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Crnkl1P63154 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Crnkl1P63154 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Crnkl1P63154 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Crnkl1P63154 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crnkl1P63154 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.76■□□□□ 0.59
Crnkl1P63154 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crnkl1P63154 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Crnkl1P63154 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crnkl1P63154 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Crnkl1P63154 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crnkl1P63154 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Crnkl1P63154 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Crnkl1P63154 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crnkl1P63154 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crnkl1P63154 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crnkl1P63154 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crnkl1P63154 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Crnkl1P63154 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Crnkl1P63154 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Crnkl1P63154 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Crnkl1P63154 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Crnkl1P63154 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Crnkl1P63154 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.75■□□□□ 0.59
Crnkl1P63154 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Crnkl1P63154 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.75■□□□□ 0.59
Crnkl1P63154 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Crnkl1P63154 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Crnkl1P63154 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Crnkl1P63154 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Crnkl1P63154 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Crnkl1P63154 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Crnkl1P63154 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Crnkl1P63154 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Crnkl1P63154 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crnkl1P63154 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Crnkl1P63154 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crnkl1P63154 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.74■□□□□ 0.59
Crnkl1P63154 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crnkl1P63154 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crnkl1P63154 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crnkl1P63154 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crnkl1P63154 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crnkl1P63154 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.73■□□□□ 0.59
Crnkl1P63154 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Crnkl1P63154 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Crnkl1P63154 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Crnkl1P63154 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Crnkl1P63154 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Crnkl1P63154 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Crnkl1P63154 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.73■□□□□ 0.59
Crnkl1P63154 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.73■□□□□ 0.59
Crnkl1P63154 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Crnkl1P63154 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.73■□□□□ 0.59
Crnkl1P63154 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.73■□□□□ 0.59
Crnkl1P63154 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Crnkl1P63154 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Crnkl1P63154 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Crnkl1P63154 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Crnkl1P63154 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Crnkl1P63154 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Crnkl1P63154 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms