Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lim2P56563 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lim2P56563 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lim2P56563 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Lim2P56563 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lim2P56563 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lim2P56563 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lim2P56563 Gm42642-201ENSMUST00000200683 355 ntBASIC19.06■□□□□ 0.64
Lim2P56563 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Lim2P56563 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.06■□□□□ 0.64
Lim2P56563 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lim2P56563 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lim2P56563 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lim2P56563 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lim2P56563 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lim2P56563 Gm42778-201ENSMUST00000199644 553 ntBASIC19.05■□□□□ 0.64
Lim2P56563 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lim2P56563 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lim2P56563 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lim2P56563 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.05■□□□□ 0.64
Lim2P56563 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lim2P56563 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lim2P56563 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lim2P56563 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Lim2P56563 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lim2P56563 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Lim2P56563 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lim2P56563 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lim2P56563 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lim2P56563 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lim2P56563 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Lim2P56563 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lim2P56563 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Lim2P56563 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lim2P56563 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.04■□□□□ 0.64
Lim2P56563 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lim2P56563 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lim2P56563 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lim2P56563 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lim2P56563 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lim2P56563 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lim2P56563 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Lim2P56563 Reep4-203ENSMUST00000226563 1444 ntBASIC19.03■□□□□ 0.64
Lim2P56563 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lim2P56563 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lim2P56563 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lim2P56563 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lim2P56563 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lim2P56563 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.02■□□□□ 0.64
Lim2P56563 Golph3-205ENSMUST00000228671 2842 ntBASIC19.02■□□□□ 0.64
Lim2P56563 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Lim2P56563 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.02■□□□□ 0.64
Lim2P56563 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lim2P56563 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lim2P56563 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lim2P56563 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Lim2P56563 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lim2P56563 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lim2P56563 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lim2P56563 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lim2P56563 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.01■□□□□ 0.63
Lim2P56563 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lim2P56563 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lim2P56563 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lim2P56563 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lim2P56563 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.01■□□□□ 0.63
Lim2P56563 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.01■□□□□ 0.63
Lim2P56563 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lim2P56563 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.01■□□□□ 0.63
Lim2P56563 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lim2P56563 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lim2P56563 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.01■□□□□ 0.63
Lim2P56563 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lim2P56563 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lim2P56563 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lim2P56563 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lim2P56563 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19■□□□□ 0.63
Lim2P56563 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19■□□□□ 0.63
Lim2P56563 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Lim2P56563 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Lim2P56563 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lim2P56563 Gm26571-201ENSMUST00000181399 666 ntBASIC19■□□□□ 0.63
Lim2P56563 Gm10033-202ENSMUST00000211874 928 ntBASIC19■□□□□ 0.63
Lim2P56563 Gm18671-201ENSMUST00000214826 683 ntBASIC19■□□□□ 0.63
Lim2P56563 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19■□□□□ 0.63
Lim2P56563 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Lim2P56563 Gm18688-201ENSMUST00000204695 1859 ntBASIC19■□□□□ 0.63
Lim2P56563 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19■□□□□ 0.63
Lim2P56563 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lim2P56563 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lim2P56563 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Lim2P56563 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lim2P56563 Gm13234-201ENSMUST00000120010 747 ntBASIC18.99■□□□□ 0.63
Lim2P56563 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lim2P56563 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lim2P56563 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
Lim2P56563 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.99■□□□□ 0.63
Lim2P56563 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lim2P56563 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lim2P56563 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms