Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TgfaP48030 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TgfaP48030 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TgfaP48030 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.55■□□□□ 0.24
TgfaP48030 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TgfaP48030 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TgfaP48030 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TgfaP48030 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TgfaP48030 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TgfaP48030 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TgfaP48030 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TgfaP48030 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TgfaP48030 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TgfaP48030 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TgfaP48030 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TgfaP48030 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TgfaP48030 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TgfaP48030 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TgfaP48030 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TgfaP48030 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TgfaP48030 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TgfaP48030 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TgfaP48030 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TgfaP48030 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.54■□□□□ 0.24
TgfaP48030 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.54■□□□□ 0.24
TgfaP48030 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TgfaP48030 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.54■□□□□ 0.24
TgfaP48030 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TgfaP48030 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TgfaP48030 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TgfaP48030 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TgfaP48030 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TgfaP48030 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TgfaP48030 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TgfaP48030 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TgfaP48030 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TgfaP48030 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TgfaP48030 Gm715-201ENSMUST00000117865 831 ntBASIC16.53■□□□□ 0.24
TgfaP48030 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.53■□□□□ 0.24
TgfaP48030 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TgfaP48030 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TgfaP48030 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TgfaP48030 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TgfaP48030 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TgfaP48030 Dio3-201ENSMUST00000097228 1449 ntBASIC16.53■□□□□ 0.24
TgfaP48030 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TgfaP48030 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TgfaP48030 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TgfaP48030 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TgfaP48030 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TgfaP48030 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TgfaP48030 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TgfaP48030 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TgfaP48030 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.52■□□□□ 0.24
TgfaP48030 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TgfaP48030 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.52■□□□□ 0.24
TgfaP48030 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.52■□□□□ 0.24
TgfaP48030 Gm18666-201ENSMUST00000190039 958 ntBASIC16.52■□□□□ 0.24
TgfaP48030 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TgfaP48030 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.52■□□□□ 0.24
TgfaP48030 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TgfaP48030 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.52■□□□□ 0.24
TgfaP48030 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TgfaP48030 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TgfaP48030 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TgfaP48030 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TgfaP48030 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TgfaP48030 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TgfaP48030 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TgfaP48030 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TgfaP48030 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TgfaP48030 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.51■□□□□ 0.23
TgfaP48030 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.51■□□□□ 0.23
TgfaP48030 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TgfaP48030 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TgfaP48030 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TgfaP48030 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TgfaP48030 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TgfaP48030 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TgfaP48030 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TgfaP48030 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TgfaP48030 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TgfaP48030 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TgfaP48030 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TgfaP48030 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TgfaP48030 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TgfaP48030 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.5■□□□□ 0.23
TgfaP48030 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.5■□□□□ 0.23
TgfaP48030 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TgfaP48030 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.5■□□□□ 0.23
TgfaP48030 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TgfaP48030 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.5■□□□□ 0.23
TgfaP48030 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TgfaP48030 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TgfaP48030 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.49■□□□□ 0.23
TgfaP48030 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TgfaP48030 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TgfaP48030 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.49■□□□□ 0.23
TgfaP48030 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TgfaP48030 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms