Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-2P42586 Iqck-206ENSMUST00000208658 2891 ntBASIC17.51■□□□□ 0.39
Nkx2-2P42586 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-2P42586 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx2-2P42586 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Nkx2-2P42586 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-2P42586 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-2P42586 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Nkx2-2P42586 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.5■□□□□ 0.39
Nkx2-2P42586 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-2P42586 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-2P42586 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-2P42586 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-2P42586 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-2P42586 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-2P42586 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Nkx2-2P42586 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-2P42586 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx2-2P42586 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-2P42586 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-2P42586 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-2P42586 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.49■□□□□ 0.39
Nkx2-2P42586 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-2P42586 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-2P42586 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-2P42586 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-2P42586 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-2P42586 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-2P42586 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Nkx2-2P42586 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Nkx2-2P42586 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-2P42586 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Nkx2-2P42586 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.48■□□□□ 0.39
Nkx2-2P42586 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-2P42586 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-2P42586 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-2P42586 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.48■□□□□ 0.39
Nkx2-2P42586 Gm38205-201ENSMUST00000192243 258 ntBASIC17.48■□□□□ 0.39
Nkx2-2P42586 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Nkx2-2P42586 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-2P42586 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-2P42586 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-2P42586 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-2P42586 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-2P42586 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Nkx2-2P42586 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-2P42586 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-2P42586 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-2P42586 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-2P42586 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-2P42586 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-2P42586 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nkx2-2P42586 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-2P42586 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-2P42586 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-2P42586 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nkx2-2P42586 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-2P42586 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-2P42586 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-2P42586 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.47■□□□□ 0.39
Nkx2-2P42586 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.46■□□□□ 0.39
Nkx2-2P42586 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-2P42586 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-2P42586 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-2P42586 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-2P42586 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nkx2-2P42586 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nkx2-2P42586 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-2P42586 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nkx2-2P42586 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nkx2-2P42586 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-2P42586 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nkx2-2P42586 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nkx2-2P42586 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Nkx2-2P42586 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-2P42586 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-2P42586 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-2P42586 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.45■□□□□ 0.38
Nkx2-2P42586 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-2P42586 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.45■□□□□ 0.38
Nkx2-2P42586 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.45■□□□□ 0.38
Nkx2-2P42586 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.45■□□□□ 0.38
Nkx2-2P42586 Gm9988-201ENSMUST00000069786 435 ntBASIC17.45■□□□□ 0.38
Nkx2-2P42586 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-2P42586 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-2P42586 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-2P42586 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-2P42586 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-2P42586 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-2P42586 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-2P42586 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-2P42586 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-2P42586 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-2P42586 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.44■□□□□ 0.38
Nkx2-2P42586 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-2P42586 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-2P42586 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-2P42586 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.44■□□□□ 0.38
Nkx2-2P42586 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-2P42586 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms