Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Sox6P40645 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox6P40645 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.81■□□□□ 0.44
Sox6P40645 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
Sox6P40645 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox6P40645 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox6P40645 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Sox6P40645 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox6P40645 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox6P40645 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox6P40645 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox6P40645 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Sox6P40645 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.8■□□□□ 0.44
Sox6P40645 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox6P40645 Gm43137-201ENSMUST00000198052 594 ntBASIC17.8■□□□□ 0.44
Sox6P40645 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox6P40645 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sox6P40645 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox6P40645 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox6P40645 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox6P40645 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.8■□□□□ 0.44
Sox6P40645 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox6P40645 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox6P40645 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Sox6P40645 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Sox6P40645 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox6P40645 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox6P40645 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox6P40645 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox6P40645 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Sox6P40645 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Sox6P40645 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sox6P40645 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox6P40645 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox6P40645 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox6P40645 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox6P40645 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox6P40645 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.78■□□□□ 0.44
Sox6P40645 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.78■□□□□ 0.44
Sox6P40645 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.78■□□□□ 0.44
Sox6P40645 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox6P40645 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox6P40645 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox6P40645 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox6P40645 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox6P40645 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox6P40645 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Sox6P40645 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox6P40645 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox6P40645 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.77■□□□□ 0.44
Sox6P40645 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sox6P40645 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox6P40645 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Sox6P40645 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox6P40645 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Sox6P40645 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Sox6P40645 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.77■□□□□ 0.44
Sox6P40645 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sox6P40645 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Sox6P40645 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sox6P40645 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sox6P40645 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sox6P40645 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sox6P40645 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sox6P40645 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox6P40645 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox6P40645 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sox6P40645 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox6P40645 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sox6P40645 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox6P40645 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.76■□□□□ 0.43
Sox6P40645 Gm27454-201ENSMUST00000185090 204 ntBASIC17.76■□□□□ 0.43
Sox6P40645 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sox6P40645 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox6P40645 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox6P40645 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.75■□□□□ 0.43
Sox6P40645 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox6P40645 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Sox6P40645 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Sox6P40645 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox6P40645 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Sox6P40645 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox6P40645 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Sox6P40645 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox6P40645 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Sox6P40645 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sox6P40645 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox6P40645 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox6P40645 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox6P40645 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox6P40645 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox6P40645 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sox6P40645 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox6P40645 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox6P40645 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox6P40645 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox6P40645 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.74■□□□□ 0.43
Sox6P40645 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sox6P40645 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Sox6P40645 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms