Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LdlrP35951 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.93■□□□□ 0.62
LdlrP35951 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LdlrP35951 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LdlrP35951 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
LdlrP35951 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LdlrP35951 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LdlrP35951 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LdlrP35951 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.92■□□□□ 0.62
LdlrP35951 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LdlrP35951 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LdlrP35951 Gm43017-201ENSMUST00000198296 752 ntBASIC18.92■□□□□ 0.62
LdlrP35951 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LdlrP35951 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.92■□□□□ 0.62
LdlrP35951 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LdlrP35951 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LdlrP35951 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LdlrP35951 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LdlrP35951 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LdlrP35951 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LdlrP35951 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LdlrP35951 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LdlrP35951 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LdlrP35951 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LdlrP35951 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LdlrP35951 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LdlrP35951 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LdlrP35951 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LdlrP35951 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LdlrP35951 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.9■□□□□ 0.62
LdlrP35951 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LdlrP35951 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LdlrP35951 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LdlrP35951 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LdlrP35951 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LdlrP35951 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LdlrP35951 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LdlrP35951 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LdlrP35951 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LdlrP35951 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LdlrP35951 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.9■□□□□ 0.62
LdlrP35951 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LdlrP35951 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LdlrP35951 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LdlrP35951 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
LdlrP35951 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.89■□□□□ 0.61
LdlrP35951 Gm29257-201ENSMUST00000186115 639 ntBASIC18.89■□□□□ 0.61
LdlrP35951 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LdlrP35951 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LdlrP35951 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LdlrP35951 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LdlrP35951 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LdlrP35951 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LdlrP35951 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LdlrP35951 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LdlrP35951 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LdlrP35951 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LdlrP35951 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LdlrP35951 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LdlrP35951 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.88■□□□□ 0.61
LdlrP35951 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LdlrP35951 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LdlrP35951 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LdlrP35951 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
LdlrP35951 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LdlrP35951 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
LdlrP35951 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
LdlrP35951 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LdlrP35951 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.87■□□□□ 0.61
LdlrP35951 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LdlrP35951 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LdlrP35951 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.87■□□□□ 0.61
LdlrP35951 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.87■□□□□ 0.61
LdlrP35951 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LdlrP35951 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LdlrP35951 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LdlrP35951 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LdlrP35951 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LdlrP35951 Gm5874-201ENSMUST00000096101 508 ntBASIC18.87■□□□□ 0.61
LdlrP35951 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LdlrP35951 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LdlrP35951 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.86■□□□□ 0.61
LdlrP35951 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LdlrP35951 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LdlrP35951 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LdlrP35951 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
LdlrP35951 Gm8493-201ENSMUST00000196881 489 ntBASIC18.86■□□□□ 0.61
LdlrP35951 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LdlrP35951 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LdlrP35951 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LdlrP35951 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.85■□□□□ 0.61
LdlrP35951 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LdlrP35951 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LdlrP35951 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LdlrP35951 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.85■□□□□ 0.61
LdlrP35951 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LdlrP35951 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LdlrP35951 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LdlrP35951 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.84■□□□□ 0.61
LdlrP35951 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms