Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RetP35546 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RetP35546 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RetP35546 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RetP35546 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RetP35546 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RetP35546 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RetP35546 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.79■□□□□ 0.44
RetP35546 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.79■□□□□ 0.44
RetP35546 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.79■□□□□ 0.44
RetP35546 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RetP35546 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.79■□□□□ 0.44
RetP35546 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.79■□□□□ 0.44
RetP35546 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RetP35546 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RetP35546 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RetP35546 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RetP35546 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RetP35546 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
RetP35546 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RetP35546 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RetP35546 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.78■□□□□ 0.44
RetP35546 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RetP35546 Gm9988-201ENSMUST00000069786 435 ntBASIC17.78■□□□□ 0.44
RetP35546 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RetP35546 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RetP35546 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RetP35546 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RetP35546 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RetP35546 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RetP35546 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RetP35546 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RetP35546 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RetP35546 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RetP35546 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.77■□□□□ 0.43
RetP35546 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RetP35546 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RetP35546 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RetP35546 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RetP35546 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.76■□□□□ 0.43
RetP35546 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RetP35546 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RetP35546 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RetP35546 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RetP35546 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RetP35546 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RetP35546 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RetP35546 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RetP35546 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RetP35546 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
RetP35546 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.75■□□□□ 0.43
RetP35546 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RetP35546 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RetP35546 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RetP35546 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RetP35546 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.75■□□□□ 0.43
RetP35546 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.75■□□□□ 0.43
RetP35546 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.75■□□□□ 0.43
RetP35546 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RetP35546 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RetP35546 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RetP35546 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RetP35546 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RetP35546 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RetP35546 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RetP35546 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RetP35546 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
RetP35546 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RetP35546 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RetP35546 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RetP35546 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RetP35546 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RetP35546 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RetP35546 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RetP35546 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RetP35546 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RetP35546 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RetP35546 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RetP35546 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RetP35546 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RetP35546 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.73■□□□□ 0.43
RetP35546 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RetP35546 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RetP35546 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RetP35546 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
RetP35546 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RetP35546 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RetP35546 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RetP35546 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RetP35546 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.72■□□□□ 0.43
RetP35546 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RetP35546 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RetP35546 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RetP35546 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RetP35546 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.72■□□□□ 0.43
RetP35546 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.72■□□□□ 0.43
RetP35546 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RetP35546 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.72■□□□□ 0.43
RetP35546 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.72■□□□□ 0.43
RetP35546 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms