Protein–RNA interactions for Protein: P32211

Chrm4, Muscarinic acetylcholine receptor M4, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrm4P32211 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chrm4P32211 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chrm4P32211 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chrm4P32211 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
Chrm4P32211 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.39■□□□□ 0.53
Chrm4P32211 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chrm4P32211 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.39■□□□□ 0.53
Chrm4P32211 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chrm4P32211 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrm4P32211 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.38■□□□□ 0.53
Chrm4P32211 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrm4P32211 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrm4P32211 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrm4P32211 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrm4P32211 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Chrm4P32211 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Chrm4P32211 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Chrm4P32211 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Chrm4P32211 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrm4P32211 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Chrm4P32211 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chrm4P32211 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chrm4P32211 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.37■□□□□ 0.53
Chrm4P32211 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chrm4P32211 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.37■□□□□ 0.53
Chrm4P32211 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chrm4P32211 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chrm4P32211 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chrm4P32211 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chrm4P32211 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.37■□□□□ 0.53
Chrm4P32211 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chrm4P32211 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chrm4P32211 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Chrm4P32211 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chrm4P32211 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.37■□□□□ 0.53
Chrm4P32211 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chrm4P32211 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chrm4P32211 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chrm4P32211 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrm4P32211 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chrm4P32211 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chrm4P32211 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chrm4P32211 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrm4P32211 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrm4P32211 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrm4P32211 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrm4P32211 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chrm4P32211 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chrm4P32211 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrm4P32211 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chrm4P32211 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrm4P32211 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chrm4P32211 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Chrm4P32211 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrm4P32211 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrm4P32211 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.35■□□□□ 0.53
Chrm4P32211 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chrm4P32211 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chrm4P32211 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chrm4P32211 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Chrm4P32211 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrm4P32211 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chrm4P32211 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Chrm4P32211 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chrm4P32211 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrm4P32211 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.34■□□□□ 0.53
Chrm4P32211 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chrm4P32211 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrm4P32211 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chrm4P32211 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.34■□□□□ 0.53
Chrm4P32211 Gm38205-201ENSMUST00000192243 258 ntBASIC18.34■□□□□ 0.53
Chrm4P32211 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.34■□□□□ 0.53
Chrm4P32211 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrm4P32211 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chrm4P32211 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrm4P32211 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrm4P32211 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.34■□□□□ 0.53
Chrm4P32211 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chrm4P32211 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chrm4P32211 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chrm4P32211 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chrm4P32211 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Chrm4P32211 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chrm4P32211 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chrm4P32211 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Chrm4P32211 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chrm4P32211 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.33■□□□□ 0.52
Chrm4P32211 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Chrm4P32211 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chrm4P32211 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Chrm4P32211 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chrm4P32211 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chrm4P32211 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chrm4P32211 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chrm4P32211 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chrm4P32211 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Chrm4P32211 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chrm4P32211 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Chrm4P32211 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.32■□□□□ 0.52
Chrm4P32211 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms