Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ccl3P10855 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccl3P10855 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccl3P10855 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.92■□□□□ 0.3
Ccl3P10855 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccl3P10855 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccl3P10855 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccl3P10855 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Ccl3P10855 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccl3P10855 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccl3P10855 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccl3P10855 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccl3P10855 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccl3P10855 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccl3P10855 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccl3P10855 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccl3P10855 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccl3P10855 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ccl3P10855 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccl3P10855 Gm2559-201ENSMUST00000201323 363 ntBASIC16.91■□□□□ 0.3
Ccl3P10855 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccl3P10855 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccl3P10855 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccl3P10855 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Ccl3P10855 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccl3P10855 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccl3P10855 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccl3P10855 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccl3P10855 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccl3P10855 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.91■□□□□ 0.3
Ccl3P10855 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccl3P10855 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccl3P10855 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.9■□□□□ 0.3
Ccl3P10855 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccl3P10855 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ccl3P10855 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.9■□□□□ 0.3
Ccl3P10855 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ccl3P10855 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.9■□□□□ 0.3
Ccl3P10855 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccl3P10855 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccl3P10855 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccl3P10855 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccl3P10855 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccl3P10855 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ccl3P10855 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ccl3P10855 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ccl3P10855 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ccl3P10855 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.89■□□□□ 0.29
Ccl3P10855 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Ccl3P10855 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ccl3P10855 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccl3P10855 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccl3P10855 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccl3P10855 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccl3P10855 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.89■□□□□ 0.29
Ccl3P10855 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccl3P10855 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccl3P10855 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccl3P10855 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.89■□□□□ 0.29
Ccl3P10855 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccl3P10855 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccl3P10855 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccl3P10855 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccl3P10855 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccl3P10855 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.88■□□□□ 0.29
Ccl3P10855 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccl3P10855 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ccl3P10855 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccl3P10855 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.88■□□□□ 0.29
Ccl3P10855 Gm5643-201ENSMUST00000117081 966 ntBASIC16.88■□□□□ 0.29
Ccl3P10855 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccl3P10855 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccl3P10855 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccl3P10855 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ccl3P10855 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Ccl3P10855 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccl3P10855 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ccl3P10855 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccl3P10855 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccl3P10855 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.87■□□□□ 0.29
Ccl3P10855 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccl3P10855 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.86■□□□□ 0.29
Ccl3P10855 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.86■□□□□ 0.29
Ccl3P10855 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccl3P10855 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccl3P10855 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.86■□□□□ 0.29
Ccl3P10855 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.86■□□□□ 0.29
Ccl3P10855 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.86■□□□□ 0.29
Ccl3P10855 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccl3P10855 Dio3-201ENSMUST00000097228 1449 ntBASIC16.86■□□□□ 0.29
Ccl3P10855 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.86■□□□□ 0.29
Ccl3P10855 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Ccl3P10855 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccl3P10855 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccl3P10855 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccl3P10855 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ccl3P10855 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.85■□□□□ 0.29
Ccl3P10855 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccl3P10855 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccl3P10855 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms