Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P04214 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.15■□□□□ 0.82
P04214 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P04214 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.15■□□□□ 0.82
P04214 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P04214 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
P04214 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.14■□□□□ 0.81
P04214 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.14■□□□□ 0.81
P04214 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
P04214 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.14■□□□□ 0.81
P04214 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
P04214 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
P04214 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
P04214 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.14■□□□□ 0.81
P04214 Gm37055-201ENSMUST00000191866 133 ntBASIC20.14■□□□□ 0.81
P04214 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
P04214 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
P04214 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P04214 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.13■□□□□ 0.81
P04214 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P04214 Mir1199-201ENSMUST00000117015 119 ntBASIC20.13■□□□□ 0.81
P04214 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.13■□□□□ 0.81
P04214 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
P04214 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
P04214 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P04214 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.13■□□□□ 0.81
P04214 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P04214 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P04214 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P04214 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P04214 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.12■□□□□ 0.81
P04214 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.12■□□□□ 0.81
P04214 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P04214 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P04214 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P04214 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
P04214 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.12■□□□□ 0.81
P04214 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.12■□□□□ 0.81
P04214 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P04214 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04214 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04214 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04214 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04214 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.11■□□□□ 0.81
P04214 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04214 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.11■□□□□ 0.81
P04214 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04214 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04214 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04214 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.11■□□□□ 0.81
P04214 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P04214 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.1■□□□□ 0.81
P04214 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.1■□□□□ 0.81
P04214 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P04214 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.1■□□□□ 0.81
P04214 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
P04214 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P04214 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
P04214 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P04214 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
P04214 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.1■□□□□ 0.81
P04214 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P04214 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.09■□□□□ 0.81
P04214 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
P04214 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
P04214 Gm11643-201ENSMUST00000119578 864 ntBASIC20.09■□□□□ 0.81
P04214 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.09■□□□□ 0.81
P04214 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.09■□□□□ 0.81
P04214 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P04214 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P04214 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
P04214 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
P04214 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
P04214 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
P04214 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
P04214 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
P04214 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.08■□□□□ 0.81
P04214 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
P04214 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P04214 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.08■□□□□ 0.81
P04214 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
P04214 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
P04214 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
P04214 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
P04214 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.08■□□□□ 0.8
P04214 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04214 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04214 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04214 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04214 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04214 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04214 Gm13158-201ENSMUST00000122007 736 ntBASIC20.07■□□□□ 0.8
P04214 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.07■□□□□ 0.8
P04214 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.07■□□□□ 0.8
P04214 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
P04214 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04214 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.07■□□□□ 0.8
P04214 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04214 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
P04214 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms