Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
Cdh16O88338 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh16O88338 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Cdh16O88338 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh16O88338 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh16O88338 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh16O88338 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh16O88338 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh16O88338 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.63■□□□□ 0.57
Cdh16O88338 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cdh16O88338 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.63■□□□□ 0.57
Cdh16O88338 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh16O88338 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh16O88338 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh16O88338 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh16O88338 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh16O88338 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh16O88338 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh16O88338 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh16O88338 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh16O88338 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh16O88338 Gm15546-201ENSMUST00000122095 826 ntBASIC18.62■□□□□ 0.57
Cdh16O88338 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.62■□□□□ 0.57
Cdh16O88338 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.62■□□□□ 0.57
Cdh16O88338 Gm7143-201ENSMUST00000222811 859 ntBASIC18.62■□□□□ 0.57
Cdh16O88338 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh16O88338 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh16O88338 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh16O88338 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Cdh16O88338 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh16O88338 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh16O88338 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cdh16O88338 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh16O88338 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.61■□□□□ 0.57
Cdh16O88338 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh16O88338 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh16O88338 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cdh16O88338 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh16O88338 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh16O88338 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh16O88338 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.61■□□□□ 0.57
Cdh16O88338 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh16O88338 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.61■□□□□ 0.57
Cdh16O88338 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh16O88338 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cdh16O88338 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh16O88338 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh16O88338 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cdh16O88338 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh16O88338 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh16O88338 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh16O88338 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh16O88338 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh16O88338 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.6■□□□□ 0.57
Cdh16O88338 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh16O88338 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh16O88338 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh16O88338 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh16O88338 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.6■□□□□ 0.57
Cdh16O88338 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Cdh16O88338 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh16O88338 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh16O88338 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.6■□□□□ 0.57
Cdh16O88338 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh16O88338 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh16O88338 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh16O88338 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh16O88338 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh16O88338 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh16O88338 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh16O88338 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh16O88338 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh16O88338 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cdh16O88338 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdh16O88338 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
Cdh16O88338 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdh16O88338 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Cdh16O88338 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Cdh16O88338 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdh16O88338 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
Cdh16O88338 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh16O88338 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh16O88338 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh16O88338 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cdh16O88338 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh16O88338 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh16O88338 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh16O88338 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh16O88338 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh16O88338 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh16O88338 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh16O88338 Gm7417-201ENSMUST00000192950 473 ntBASIC18.57■□□□□ 0.56
Cdh16O88338 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh16O88338 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh16O88338 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh16O88338 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cdh16O88338 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh16O88338 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh16O88338 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdh16O88338 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms