Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim1O70400 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim1O70400 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim1O70400 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim1O70400 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim1O70400 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim1O70400 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim1O70400 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pdlim1O70400 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.8■□□□□ 0.6
Pdlim1O70400 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.8■□□□□ 0.6
Pdlim1O70400 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.8■□□□□ 0.6
Pdlim1O70400 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
Pdlim1O70400 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.8■□□□□ 0.6
Pdlim1O70400 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.8■□□□□ 0.6
Pdlim1O70400 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim1O70400 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim1O70400 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim1O70400 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim1O70400 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim1O70400 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim1O70400 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim1O70400 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Pdlim1O70400 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim1O70400 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim1O70400 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim1O70400 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim1O70400 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim1O70400 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pdlim1O70400 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim1O70400 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim1O70400 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim1O70400 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim1O70400 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim1O70400 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim1O70400 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim1O70400 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Pdlim1O70400 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.78■□□□□ 0.6
Pdlim1O70400 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.78■□□□□ 0.6
Pdlim1O70400 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Pdlim1O70400 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim1O70400 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim1O70400 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim1O70400 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim1O70400 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim1O70400 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim1O70400 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim1O70400 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.77■□□□□ 0.6
Pdlim1O70400 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Pdlim1O70400 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim1O70400 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.77■□□□□ 0.6
Pdlim1O70400 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Pdlim1O70400 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim1O70400 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pdlim1O70400 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim1O70400 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim1O70400 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim1O70400 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim1O70400 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.76■□□□□ 0.59
Pdlim1O70400 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim1O70400 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim1O70400 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pdlim1O70400 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pdlim1O70400 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim1O70400 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Pdlim1O70400 Gm10849-201ENSMUST00000100397 618 ntBASIC18.76■□□□□ 0.59
Pdlim1O70400 Gm13534-201ENSMUST00000121169 513 ntBASIC18.76■□□□□ 0.59
Pdlim1O70400 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.76■□□□□ 0.59
Pdlim1O70400 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.76■□□□□ 0.59
Pdlim1O70400 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim1O70400 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.76■□□□□ 0.59
Pdlim1O70400 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim1O70400 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim1O70400 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pdlim1O70400 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim1O70400 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim1O70400 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pdlim1O70400 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim1O70400 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim1O70400 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim1O70400 AV356131-201ENSMUST00000206201 750 ntBASIC18.75■□□□□ 0.59
Pdlim1O70400 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.75■□□□□ 0.59
Pdlim1O70400 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pdlim1O70400 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pdlim1O70400 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim1O70400 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim1O70400 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim1O70400 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim1O70400 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim1O70400 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pdlim1O70400 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pdlim1O70400 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim1O70400 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.74■□□□□ 0.59
Pdlim1O70400 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pdlim1O70400 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim1O70400 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim1O70400 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim1O70400 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim1O70400 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim1O70400 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pdlim1O70400 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms