Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Kcnu1O54982 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Kcnu1O54982 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Kcnu1O54982 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kcnu1O54982 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kcnu1O54982 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Kcnu1O54982 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Kcnu1O54982 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Kcnu1O54982 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Kcnu1O54982 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.32■□□□□ 0.84
Kcnu1O54982 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.32■□□□□ 0.84
Kcnu1O54982 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kcnu1O54982 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kcnu1O54982 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kcnu1O54982 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kcnu1O54982 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Kcnu1O54982 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Kcnu1O54982 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Kcnu1O54982 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Kcnu1O54982 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.31■□□□□ 0.84
Kcnu1O54982 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Kcnu1O54982 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kcnu1O54982 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.3■□□□□ 0.84
Kcnu1O54982 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kcnu1O54982 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kcnu1O54982 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kcnu1O54982 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Kcnu1O54982 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Kcnu1O54982 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kcnu1O54982 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Kcnu1O54982 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Kcnu1O54982 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kcnu1O54982 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Kcnu1O54982 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kcnu1O54982 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Kcnu1O54982 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kcnu1O54982 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kcnu1O54982 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kcnu1O54982 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kcnu1O54982 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.29■□□□□ 0.84
Kcnu1O54982 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kcnu1O54982 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Kcnu1O54982 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kcnu1O54982 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Kcnu1O54982 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kcnu1O54982 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Kcnu1O54982 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Kcnu1O54982 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kcnu1O54982 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kcnu1O54982 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kcnu1O54982 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Kcnu1O54982 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kcnu1O54982 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kcnu1O54982 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kcnu1O54982 Gm40848-201ENSMUST00000221998 324 ntBASIC20.28■□□□□ 0.84
Kcnu1O54982 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kcnu1O54982 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kcnu1O54982 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Kcnu1O54982 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kcnu1O54982 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kcnu1O54982 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Kcnu1O54982 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kcnu1O54982 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kcnu1O54982 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kcnu1O54982 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Kcnu1O54982 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Kcnu1O54982 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Kcnu1O54982 Gm43017-201ENSMUST00000198296 752 ntBASIC20.27■□□□□ 0.84
Kcnu1O54982 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kcnu1O54982 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Kcnu1O54982 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Kcnu1O54982 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Kcnu1O54982 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Kcnu1O54982 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Kcnu1O54982 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Kcnu1O54982 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kcnu1O54982 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kcnu1O54982 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.26■□□□□ 0.83
Kcnu1O54982 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Kcnu1O54982 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Kcnu1O54982 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Kcnu1O54982 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kcnu1O54982 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kcnu1O54982 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kcnu1O54982 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kcnu1O54982 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kcnu1O54982 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcnu1O54982 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcnu1O54982 Gm27801-201ENSMUST00000184174 223 ntBASIC20.25■□□□□ 0.83
Kcnu1O54982 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.25■□□□□ 0.83
Kcnu1O54982 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kcnu1O54982 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.24■□□□□ 0.83
Kcnu1O54982 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kcnu1O54982 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kcnu1O54982 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kcnu1O54982 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Kcnu1O54982 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.24■□□□□ 0.83
Kcnu1O54982 Gm7860-201ENSMUST00000121190 879 ntBASIC20.24■□□□□ 0.83
Kcnu1O54982 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kcnu1O54982 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms