Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfrsf11aO35305 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfrsf11aO35305 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfrsf11aO35305 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfrsf11aO35305 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Tnfrsf11aO35305 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Tnfrsf11aO35305 Golph3-205ENSMUST00000228671 2842 ntBASIC20.59■□□□□ 0.89
Tnfrsf11aO35305 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfrsf11aO35305 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfrsf11aO35305 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfrsf11aO35305 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.58■□□□□ 0.89
Tnfrsf11aO35305 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfrsf11aO35305 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfrsf11aO35305 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tnfrsf11aO35305 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tnfrsf11aO35305 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tnfrsf11aO35305 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tnfrsf11aO35305 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf11aO35305 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.57■□□□□ 0.88
Tnfrsf11aO35305 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf11aO35305 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Tnfrsf11aO35305 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf11aO35305 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf11aO35305 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf11aO35305 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf11aO35305 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.57■□□□□ 0.88
Tnfrsf11aO35305 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf11aO35305 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf11aO35305 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.57■□□□□ 0.88
Tnfrsf11aO35305 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf11aO35305 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf11aO35305 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Tnfrsf11aO35305 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf11aO35305 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf11aO35305 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf11aO35305 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Tnfrsf11aO35305 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf11aO35305 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Tnfrsf11aO35305 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf11aO35305 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.56■□□□□ 0.88
Tnfrsf11aO35305 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf11aO35305 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf11aO35305 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf11aO35305 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf11aO35305 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf11aO35305 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf11aO35305 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
Tnfrsf11aO35305 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Tnfrsf11aO35305 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf11aO35305 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf11aO35305 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf11aO35305 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.55■□□□□ 0.88
Tnfrsf11aO35305 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf11aO35305 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.55■□□□□ 0.88
Tnfrsf11aO35305 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf11aO35305 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf11aO35305 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Tnfrsf11aO35305 Gm18284-201ENSMUST00000172604 624 ntBASIC20.54■□□□□ 0.88
Tnfrsf11aO35305 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.54■□□□□ 0.88
Tnfrsf11aO35305 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.54■□□□□ 0.88
Tnfrsf11aO35305 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.54■□□□□ 0.88
Tnfrsf11aO35305 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.54■□□□□ 0.88
Tnfrsf11aO35305 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf11aO35305 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf11aO35305 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf11aO35305 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Tnfrsf11aO35305 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf11aO35305 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Tnfrsf11aO35305 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf11aO35305 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf11aO35305 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.54■□□□□ 0.88
Tnfrsf11aO35305 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.54■□□□□ 0.88
Tnfrsf11aO35305 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf11aO35305 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf11aO35305 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf11aO35305 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf11aO35305 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf11aO35305 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Tnfrsf11aO35305 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf11aO35305 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.53■□□□□ 0.88
Tnfrsf11aO35305 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Tnfrsf11aO35305 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf11aO35305 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.53■□□□□ 0.88
Tnfrsf11aO35305 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf11aO35305 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf11aO35305 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfrsf11aO35305 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfrsf11aO35305 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfrsf11aO35305 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfrsf11aO35305 Gm5874-201ENSMUST00000096101 508 ntBASIC20.52■□□□□ 0.88
Tnfrsf11aO35305 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfrsf11aO35305 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.52■□□□□ 0.87
Tnfrsf11aO35305 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf11aO35305 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf11aO35305 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Tnfrsf11aO35305 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf11aO35305 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf11aO35305 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf11aO35305 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.51■□□□□ 0.87
Tnfrsf11aO35305 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms