Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1aO08602 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1aO08602 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1aO08602 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1aO08602 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1aO08602 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Raet1aO08602 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Raet1aO08602 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1aO08602 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Raet1aO08602 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Raet1aO08602 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Raet1aO08602 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.85■□□□□ 0.29
Raet1aO08602 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.85■□□□□ 0.29
Raet1aO08602 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Raet1aO08602 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Raet1aO08602 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.85■□□□□ 0.29
Raet1aO08602 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Raet1aO08602 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Raet1aO08602 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Raet1aO08602 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Raet1aO08602 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Raet1aO08602 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.84■□□□□ 0.29
Raet1aO08602 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1aO08602 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1aO08602 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1aO08602 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1aO08602 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Raet1aO08602 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Raet1aO08602 Gm43060-201ENSMUST00000200621 289 ntBASIC16.84■□□□□ 0.29
Raet1aO08602 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.84■□□□□ 0.29
Raet1aO08602 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.84■□□□□ 0.29
Raet1aO08602 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1aO08602 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.84■□□□□ 0.29
Raet1aO08602 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1aO08602 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1aO08602 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1aO08602 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1aO08602 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1aO08602 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1aO08602 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.84■□□□□ 0.29
Raet1aO08602 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Raet1aO08602 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Raet1aO08602 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Raet1aO08602 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Raet1aO08602 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Raet1aO08602 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Raet1aO08602 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
Raet1aO08602 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Raet1aO08602 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Raet1aO08602 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Raet1aO08602 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1aO08602 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1aO08602 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.82■□□□□ 0.28
Raet1aO08602 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1aO08602 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1aO08602 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1aO08602 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1aO08602 Gm7860-201ENSMUST00000121190 879 ntBASIC16.82■□□□□ 0.28
Raet1aO08602 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1aO08602 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.82■□□□□ 0.28
Raet1aO08602 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1aO08602 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1aO08602 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1aO08602 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1aO08602 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1aO08602 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1aO08602 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raet1aO08602 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.81■□□□□ 0.28
Raet1aO08602 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raet1aO08602 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raet1aO08602 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.81■□□□□ 0.28
Raet1aO08602 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.81■□□□□ 0.28
Raet1aO08602 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.81■□□□□ 0.28
Raet1aO08602 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raet1aO08602 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raet1aO08602 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.81■□□□□ 0.28
Raet1aO08602 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raet1aO08602 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Raet1aO08602 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raet1aO08602 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raet1aO08602 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Raet1aO08602 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raet1aO08602 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Raet1aO08602 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1aO08602 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Raet1aO08602 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1aO08602 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.8■□□□□ 0.28
Raet1aO08602 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1aO08602 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Raet1aO08602 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1aO08602 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1aO08602 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.8■□□□□ 0.28
Raet1aO08602 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1aO08602 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1aO08602 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1aO08602 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1aO08602 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Raet1aO08602 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1aO08602 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1aO08602 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms