Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Golph3-205ENSMUST00000228671 2842 ntBASIC19.52■□□□□ 0.72
Atf6F6VAN0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atf6F6VAN0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atf6F6VAN0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atf6F6VAN0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atf6F6VAN0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.52■□□□□ 0.72
Atf6F6VAN0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atf6F6VAN0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Atf6F6VAN0 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.52■□□□□ 0.72
Atf6F6VAN0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Atf6F6VAN0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Atf6F6VAN0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Atf6F6VAN0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Atf6F6VAN0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Atf6F6VAN0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Atf6F6VAN0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.51■□□□□ 0.71
Atf6F6VAN0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf6F6VAN0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf6F6VAN0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Atf6F6VAN0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Atf6F6VAN0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.51■□□□□ 0.71
Atf6F6VAN0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf6F6VAN0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Atf6F6VAN0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf6F6VAN0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Atf6F6VAN0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf6F6VAN0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.51■□□□□ 0.71
Atf6F6VAN0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf6F6VAN0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf6F6VAN0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf6F6VAN0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Atf6F6VAN0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Atf6F6VAN0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf6F6VAN0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf6F6VAN0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf6F6VAN0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf6F6VAN0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf6F6VAN0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Atf6F6VAN0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf6F6VAN0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.5■□□□□ 0.71
Atf6F6VAN0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Atf6F6VAN0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Atf6F6VAN0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf6F6VAN0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.5■□□□□ 0.71
Atf6F6VAN0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf6F6VAN0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Atf6F6VAN0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf6F6VAN0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf6F6VAN0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf6F6VAN0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Atf6F6VAN0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf6F6VAN0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Atf6F6VAN0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf6F6VAN0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf6F6VAN0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf6F6VAN0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf6F6VAN0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Atf6F6VAN0 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.49■□□□□ 0.71
Atf6F6VAN0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf6F6VAN0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf6F6VAN0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf6F6VAN0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf6F6VAN0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf6F6VAN0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.49■□□□□ 0.71
Atf6F6VAN0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Atf6F6VAN0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Atf6F6VAN0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Atf6F6VAN0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Atf6F6VAN0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Atf6F6VAN0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf6F6VAN0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.48■□□□□ 0.71
Atf6F6VAN0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf6F6VAN0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf6F6VAN0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Atf6F6VAN0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf6F6VAN0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf6F6VAN0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf6F6VAN0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.48■□□□□ 0.71
Atf6F6VAN0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.48■□□□□ 0.71
Atf6F6VAN0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf6F6VAN0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Atf6F6VAN0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Atf6F6VAN0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Atf6F6VAN0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Atf6F6VAN0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Atf6F6VAN0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Atf6F6VAN0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Atf6F6VAN0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atf6F6VAN0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atf6F6VAN0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atf6F6VAN0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atf6F6VAN0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atf6F6VAN0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Atf6F6VAN0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atf6F6VAN0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atf6F6VAN0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Atf6F6VAN0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atf6F6VAN0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atf6F6VAN0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atf6F6VAN0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms