Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.26■□□□□ 0.99
Krt28A6BLY7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Krt28A6BLY7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Krt28A6BLY7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Krt28A6BLY7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Krt28A6BLY7 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.25■□□□□ 0.99
Krt28A6BLY7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Krt28A6BLY7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Krt28A6BLY7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Krt28A6BLY7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Krt28A6BLY7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Krt28A6BLY7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Krt28A6BLY7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Krt28A6BLY7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Krt28A6BLY7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Krt28A6BLY7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Krt28A6BLY7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Krt28A6BLY7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Krt28A6BLY7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Krt28A6BLY7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.24■□□□□ 0.99
Krt28A6BLY7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Krt28A6BLY7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.24■□□□□ 0.99
Krt28A6BLY7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Krt28A6BLY7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.24■□□□□ 0.99
Krt28A6BLY7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.24■□□□□ 0.99
Krt28A6BLY7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Krt28A6BLY7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.24■□□□□ 0.99
Krt28A6BLY7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Krt28A6BLY7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Krt28A6BLY7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Krt28A6BLY7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Krt28A6BLY7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Krt28A6BLY7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Krt28A6BLY7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.23■□□□□ 0.99
Krt28A6BLY7 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.23■□□□□ 0.99
Krt28A6BLY7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Krt28A6BLY7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Krt28A6BLY7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Krt28A6BLY7 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Krt28A6BLY7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Krt28A6BLY7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Krt28A6BLY7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Krt28A6BLY7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Krt28A6BLY7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Krt28A6BLY7 Gm13158-201ENSMUST00000122007 736 ntBASIC21.22■□□□□ 0.99
Krt28A6BLY7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Krt28A6BLY7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Krt28A6BLY7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Krt28A6BLY7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.21■□□□□ 0.99
Krt28A6BLY7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Krt28A6BLY7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Krt28A6BLY7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Krt28A6BLY7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.21■□□□□ 0.99
Krt28A6BLY7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Krt28A6BLY7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Krt28A6BLY7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Krt28A6BLY7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Krt28A6BLY7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Krt28A6BLY7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Krt28A6BLY7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Krt28A6BLY7 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Krt28A6BLY7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.2■□□□□ 0.98
Krt28A6BLY7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Krt28A6BLY7 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.2■□□□□ 0.98
Krt28A6BLY7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Krt28A6BLY7 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.2■□□□□ 0.98
Krt28A6BLY7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Krt28A6BLY7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Krt28A6BLY7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.2■□□□□ 0.98
Krt28A6BLY7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Krt28A6BLY7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Krt28A6BLY7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Krt28A6BLY7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Krt28A6BLY7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Krt28A6BLY7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Krt28A6BLY7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Krt28A6BLY7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.2■□□□□ 0.98
Krt28A6BLY7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Krt28A6BLY7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Krt28A6BLY7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Krt28A6BLY7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Krt28A6BLY7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Krt28A6BLY7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Krt28A6BLY7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Krt28A6BLY7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Krt28A6BLY7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Krt28A6BLY7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Krt28A6BLY7 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.19■□□□□ 0.98
Krt28A6BLY7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Krt28A6BLY7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.19■□□□□ 0.98
Krt28A6BLY7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Krt28A6BLY7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Krt28A6BLY7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Krt28A6BLY7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Krt28A6BLY7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.18■□□□□ 0.98
Krt28A6BLY7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.18■□□□□ 0.98
Krt28A6BLY7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Krt28A6BLY7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Krt28A6BLY7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Krt28A6BLY7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms