Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv1-88A0A140T8N1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 Gm9870-201ENSMUST00000063874 645 ntBASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv1-88A0A140T8N1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Igkv1-88A0A140T8N1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Igkv1-88A0A140T8N1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Igkv1-88A0A140T8N1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC12.56□□□□□ -0.4
Igkv1-88A0A140T8N1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Igkv1-88A0A140T8N1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Igkv1-88A0A140T8N1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Igkv1-88A0A140T8N1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Igkv1-88A0A140T8N1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Igkv1-88A0A140T8N1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC12.56□□□□□ -0.4
Igkv1-88A0A140T8N1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Igkv1-88A0A140T8N1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Igkv1-88A0A140T8N1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Igkv1-88A0A140T8N1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Igkv1-88A0A140T8N1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Igkv1-88A0A140T8N1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv1-88A0A140T8N1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv1-88A0A140T8N1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv1-88A0A140T8N1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Igkv1-88A0A140T8N1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Igkv1-88A0A140T8N1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv1-88A0A140T8N1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv1-88A0A140T8N1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv1-88A0A140T8N1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC12.54□□□□□ -0.4
Igkv1-88A0A140T8N1 Gm7417-201ENSMUST00000192950 473 ntBASIC12.54□□□□□ -0.4
Igkv1-88A0A140T8N1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC12.54□□□□□ -0.4
Igkv1-88A0A140T8N1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Igkv1-88A0A140T8N1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Igkv1-88A0A140T8N1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv1-88A0A140T8N1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Igkv1-88A0A140T8N1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Igkv1-88A0A140T8N1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv1-88A0A140T8N1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv1-88A0A140T8N1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv1-88A0A140T8N1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Igkv1-88A0A140T8N1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv1-88A0A140T8N1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv1-88A0A140T8N1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms