Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-4A0A0G2JG37 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-4A0A0G2JG37 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-4A0A0G2JG37 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav9d-4A0A0G2JG37 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav9d-4A0A0G2JG37 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-4A0A0G2JG37 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-4A0A0G2JG37 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav9d-4A0A0G2JG37 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-4A0A0G2JG37 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-4A0A0G2JG37 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-4A0A0G2JG37 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-4A0A0G2JG37 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-4A0A0G2JG37 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Mir6236-201ENSMUST00000184437 123 ntBASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-4A0A0G2JG37 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.02□□□□□ -0.32
Trav9d-4A0A0G2JG37 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9d-4A0A0G2JG37 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9d-4A0A0G2JG37 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9d-4A0A0G2JG37 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9d-4A0A0G2JG37 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9d-4A0A0G2JG37 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9d-4A0A0G2JG37 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9d-4A0A0G2JG37 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-4A0A0G2JG37 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-4A0A0G2JG37 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav9d-4A0A0G2JG37 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Trav9d-4A0A0G2JG37 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-4A0A0G2JG37 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav9d-4A0A0G2JG37 Gm5921-201ENSMUST00000075898 882 ntBASIC13.02□□□□□ -0.33
Trav9d-4A0A0G2JG37 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-4A0A0G2JG37 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-4A0A0G2JG37 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-4A0A0G2JG37 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-4A0A0G2JG37 Rarb-207ENSMUST00000225921 2756 ntBASIC13.02□□□□□ -0.33
Trav9d-4A0A0G2JG37 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav9d-4A0A0G2JG37 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav9d-4A0A0G2JG37 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-4A0A0G2JG37 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Gm43566-201ENSMUST00000196851 808 ntBASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Gm10399-202ENSMUST00000202768 748 ntBASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-4A0A0G2JG37 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav9d-4A0A0G2JG37 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-4A0A0G2JG37 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13□□□□□ -0.33
Trav9d-4A0A0G2JG37 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-4A0A0G2JG37 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-4A0A0G2JG37 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-4A0A0G2JG37 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav9d-4A0A0G2JG37 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms