Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Igkv8-28A0A0G2JE47 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv8-28A0A0G2JE47 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv8-28A0A0G2JE47 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv8-28A0A0G2JE47 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Igkv8-28A0A0G2JE47 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv8-28A0A0G2JE47 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv8-28A0A0G2JE47 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Igkv8-28A0A0G2JE47 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Rncr4-201ENSMUST00000194541 2234 ntBASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Igkv8-28A0A0G2JE47 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Gm42939-201ENSMUST00000197514 2205 ntBASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Igkv8-28A0A0G2JE47 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv8-28A0A0G2JE47 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv8-28A0A0G2JE47 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv8-28A0A0G2JE47 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Igkv8-28A0A0G2JE47 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv8-28A0A0G2JE47 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Igkv8-28A0A0G2JE47 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv8-28A0A0G2JE47 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv8-28A0A0G2JE47 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv8-28A0A0G2JE47 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Igkv8-28A0A0G2JE47 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv8-28A0A0G2JE47 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv8-28A0A0G2JE47 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv8-28A0A0G2JE47 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Igkv8-28A0A0G2JE47 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv8-28A0A0G2JE47 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv8-28A0A0G2JE47 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv8-28A0A0G2JE47 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv8-28A0A0G2JE47 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv8-28A0A0G2JE47 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Igkv8-28A0A0G2JE47 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv8-28A0A0G2JE47 Gm18688-201ENSMUST00000204695 1859 ntBASIC11.92□□□□□ -0.5
Igkv8-28A0A0G2JE47 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv8-28A0A0G2JE47 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv8-28A0A0G2JE47 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC11.92□□□□□ -0.5
Igkv8-28A0A0G2JE47 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Igkv8-28A0A0G2JE47 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv8-28A0A0G2JE47 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv8-28A0A0G2JE47 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv8-28A0A0G2JE47 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv8-28A0A0G2JE47 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv8-28A0A0G2JE47 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Igkv8-28A0A0G2JE47 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv8-28A0A0G2JE47 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Igkv8-28A0A0G2JE47 Gm19439-201ENSMUST00000198195 2273 ntBASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Igkv8-28A0A0G2JE47 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms