Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav11A0A0B4J1J9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Trav11A0A0B4J1J9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav11A0A0B4J1J9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav11A0A0B4J1J9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav11A0A0B4J1J9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav11A0A0B4J1J9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav11A0A0B4J1J9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav11A0A0B4J1J9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav11A0A0B4J1J9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav11A0A0B4J1J9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav11A0A0B4J1J9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav11A0A0B4J1J9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav11A0A0B4J1J9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav11A0A0B4J1J9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav11A0A0B4J1J9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav11A0A0B4J1J9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav11A0A0B4J1J9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav11A0A0B4J1J9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav11A0A0B4J1J9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav11A0A0B4J1J9 AA386476-201ENSMUST00000098781 1665 ntBASIC13.07□□□□□ -0.32
Trav11A0A0B4J1J9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav11A0A0B4J1J9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav11A0A0B4J1J9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trav11A0A0B4J1J9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav11A0A0B4J1J9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav11A0A0B4J1J9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav11A0A0B4J1J9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav11A0A0B4J1J9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Trav11A0A0B4J1J9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav11A0A0B4J1J9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav11A0A0B4J1J9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav11A0A0B4J1J9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav11A0A0B4J1J9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav11A0A0B4J1J9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav11A0A0B4J1J9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav11A0A0B4J1J9 Etf1-202ENSMUST00000180351 108 ntBASIC13.06□□□□□ -0.32
Trav11A0A0B4J1J9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav11A0A0B4J1J9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trav11A0A0B4J1J9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav11A0A0B4J1J9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav11A0A0B4J1J9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav11A0A0B4J1J9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Gm10657-201ENSMUST00000193528 1031 ntBASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav11A0A0B4J1J9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav11A0A0B4J1J9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav11A0A0B4J1J9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav11A0A0B4J1J9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav11A0A0B4J1J9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav11A0A0B4J1J9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms