Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-7-dv9A0A075B639 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav6-7-dv9A0A075B639 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav6-7-dv9A0A075B639 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-7-dv9A0A075B639 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trav6-7-dv9A0A075B639 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-7-dv9A0A075B639 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-7-dv9A0A075B639 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trav6-7-dv9A0A075B639 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trav6-7-dv9A0A075B639 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Trav6-7-dv9A0A075B639 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.86■□□□□ 0.29
Trav6-7-dv9A0A075B639 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-7-dv9A0A075B639 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Trav6-7-dv9A0A075B639 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trav6-7-dv9A0A075B639 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-7-dv9A0A075B639 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-7-dv9A0A075B639 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav6-7-dv9A0A075B639 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-7-dv9A0A075B639 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trav6-7-dv9A0A075B639 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Trav6-7-dv9A0A075B639 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Trav6-7-dv9A0A075B639 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trav6-7-dv9A0A075B639 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.85■□□□□ 0.29
Trav6-7-dv9A0A075B639 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav6-7-dv9A0A075B639 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.85■□□□□ 0.29
Trav6-7-dv9A0A075B639 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.85■□□□□ 0.29
Trav6-7-dv9A0A075B639 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-7-dv9A0A075B639 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-7-dv9A0A075B639 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-7-dv9A0A075B639 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-7-dv9A0A075B639 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-7-dv9A0A075B639 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-7-dv9A0A075B639 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-7-dv9A0A075B639 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav6-7-dv9A0A075B639 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav6-7-dv9A0A075B639 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav6-7-dv9A0A075B639 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trav6-7-dv9A0A075B639 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-7-dv9A0A075B639 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trav6-7-dv9A0A075B639 Gm6139-201ENSMUST00000079261 882 ntBASIC16.83■□□□□ 0.28
Trav6-7-dv9A0A075B639 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav6-7-dv9A0A075B639 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-7-dv9A0A075B639 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-7-dv9A0A075B639 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trav6-7-dv9A0A075B639 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-7-dv9A0A075B639 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-7-dv9A0A075B639 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav6-7-dv9A0A075B639 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav6-7-dv9A0A075B639 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-7-dv9A0A075B639 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6-7-dv9A0A075B639 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms