Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.11■□□□□ 0.01
Trav4-2A0A075B638 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-2A0A075B638 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-2A0A075B638 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-2A0A075B638 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav4-2A0A075B638 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-2A0A075B638 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-2A0A075B638 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-2A0A075B638 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-2A0A075B638 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-2A0A075B638 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Trav4-2A0A075B638 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-2A0A075B638 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav4-2A0A075B638 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-2A0A075B638 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav4-2A0A075B638 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-2A0A075B638 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav4-2A0A075B638 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-2A0A075B638 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-2A0A075B638 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-2A0A075B638 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-2A0A075B638 Etf1-202ENSMUST00000180351 108 ntBASIC15.1■□□□□ 0.01
Trav4-2A0A075B638 Gm43566-201ENSMUST00000196851 808 ntBASIC15.1■□□□□ 0.01
Trav4-2A0A075B638 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.1■□□□□ 0.01
Trav4-2A0A075B638 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.1■□□□□ 0.01
Trav4-2A0A075B638 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-2A0A075B638 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-2A0A075B638 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-2A0A075B638 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-2A0A075B638 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-2A0A075B638 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.1■□□□□ 0.01
Trav4-2A0A075B638 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-2A0A075B638 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav4-2A0A075B638 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav4-2A0A075B638 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Gm9870-201ENSMUST00000063874 645 ntBASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav4-2A0A075B638 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav4-2A0A075B638 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav4-2A0A075B638 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav4-2A0A075B638 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav4-2A0A075B638 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav4-2A0A075B638 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav4-2A0A075B638 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav4-2A0A075B638 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav4-2A0A075B638 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav4-2A0A075B638 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-2A0A075B638 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-2A0A075B638 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav4-2A0A075B638 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-2A0A075B638 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav4-2A0A075B638 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-2A0A075B638 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav4-2A0A075B638 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav4-2A0A075B638 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.08■□□□□ 0
Trav4-2A0A075B638 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav4-2A0A075B638 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Trav4-2A0A075B638 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-2A0A075B638 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav4-2A0A075B638 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Trav4-2A0A075B638 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
Trav4-2A0A075B638 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav4-2A0A075B638 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trav4-2A0A075B638 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.08■□□□□ 0
Trav4-2A0A075B638 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.08■□□□□ 0
Trav4-2A0A075B638 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
Trav4-2A0A075B638 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Trav4-2A0A075B638 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4-2A0A075B638 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4-2A0A075B638 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav4-2A0A075B638 Gm40881-201ENSMUST00000223397 166 ntBASIC15.07■□□□□ 0
Trav4-2A0A075B638 Gm10232-201ENSMUST00000089221 720 ntBASIC15.07■□□□□ 0
Trav4-2A0A075B638 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.07■□□□□ 0
Trav4-2A0A075B638 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4-2A0A075B638 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4-2A0A075B638 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav4-2A0A075B638 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav4-2A0A075B638 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.06■□□□□ 0
Trav4-2A0A075B638 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav4-2A0A075B638 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav4-2A0A075B638 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 274.3 ms