Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.21■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav15d-1-dv6d-1A0A075B624 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.2■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.19■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.19■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.19■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.19■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.17■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.16■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.16■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trav15d-1-dv6d-1A0A075B624 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms