Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubd1Q9R1K7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubd1Q9R1K7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.55■□□□□ 0.72
Tubd1Q9R1K7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.55■□□□□ 0.72
Tubd1Q9R1K7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubd1Q9R1K7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.55■□□□□ 0.72
Tubd1Q9R1K7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubd1Q9R1K7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubd1Q9R1K7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Tubd1Q9R1K7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubd1Q9R1K7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.55■□□□□ 0.72
Tubd1Q9R1K7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tubd1Q9R1K7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tubd1Q9R1K7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Tubd1Q9R1K7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tubd1Q9R1K7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.54■□□□□ 0.72
Tubd1Q9R1K7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tubd1Q9R1K7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.54■□□□□ 0.72
Tubd1Q9R1K7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tubd1Q9R1K7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Tubd1Q9R1K7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tubd1Q9R1K7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tubd1Q9R1K7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tubd1Q9R1K7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Tubd1Q9R1K7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tubd1Q9R1K7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tubd1Q9R1K7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tubd1Q9R1K7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tubd1Q9R1K7 Reep4-203ENSMUST00000226563 1444 ntBASIC19.53■□□□□ 0.72
Tubd1Q9R1K7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tubd1Q9R1K7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tubd1Q9R1K7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tubd1Q9R1K7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.53■□□□□ 0.72
Tubd1Q9R1K7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.53■□□□□ 0.72
Tubd1Q9R1K7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Tubd1Q9R1K7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tubd1Q9R1K7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tubd1Q9R1K7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tubd1Q9R1K7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tubd1Q9R1K7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tubd1Q9R1K7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.52■□□□□ 0.72
Tubd1Q9R1K7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tubd1Q9R1K7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tubd1Q9R1K7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tubd1Q9R1K7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tubd1Q9R1K7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tubd1Q9R1K7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Tubd1Q9R1K7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tubd1Q9R1K7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tubd1Q9R1K7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tubd1Q9R1K7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tubd1Q9R1K7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.51■□□□□ 0.71
Tubd1Q9R1K7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tubd1Q9R1K7 Gm9988-201ENSMUST00000069786 435 ntBASIC19.51■□□□□ 0.71
Tubd1Q9R1K7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.51■□□□□ 0.71
Tubd1Q9R1K7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tubd1Q9R1K7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tubd1Q9R1K7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tubd1Q9R1K7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Tubd1Q9R1K7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Tubd1Q9R1K7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Tubd1Q9R1K7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
Tubd1Q9R1K7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tubd1Q9R1K7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tubd1Q9R1K7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tubd1Q9R1K7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tubd1Q9R1K7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tubd1Q9R1K7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tubd1Q9R1K7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tubd1Q9R1K7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tubd1Q9R1K7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Tubd1Q9R1K7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Tubd1Q9R1K7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tubd1Q9R1K7 Gm13234-201ENSMUST00000120010 747 ntBASIC19.49■□□□□ 0.71
Tubd1Q9R1K7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tubd1Q9R1K7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tubd1Q9R1K7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Tubd1Q9R1K7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Tubd1Q9R1K7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tubd1Q9R1K7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
Tubd1Q9R1K7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubd1Q9R1K7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubd1Q9R1K7 BC021767-201ENSMUST00000126387 1716 ntBASIC19.48■□□□□ 0.71
Tubd1Q9R1K7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubd1Q9R1K7 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.48■□□□□ 0.71
Tubd1Q9R1K7 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.48■□□□□ 0.71
Tubd1Q9R1K7 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.48■□□□□ 0.71
Tubd1Q9R1K7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubd1Q9R1K7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubd1Q9R1K7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tubd1Q9R1K7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubd1Q9R1K7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tubd1Q9R1K7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tubd1Q9R1K7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tubd1Q9R1K7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tubd1Q9R1K7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tubd1Q9R1K7 Gm13534-201ENSMUST00000121169 513 ntBASIC19.47■□□□□ 0.71
Tubd1Q9R1K7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.47■□□□□ 0.71
Tubd1Q9R1K7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tubd1Q9R1K7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms