Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RpgrQ9R0X5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.31■□□□□ 0.68
RpgrQ9R0X5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RpgrQ9R0X5 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RpgrQ9R0X5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RpgrQ9R0X5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
RpgrQ9R0X5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RpgrQ9R0X5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RpgrQ9R0X5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RpgrQ9R0X5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RpgrQ9R0X5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RpgrQ9R0X5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RpgrQ9R0X5 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RpgrQ9R0X5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
RpgrQ9R0X5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RpgrQ9R0X5 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.3■□□□□ 0.68
RpgrQ9R0X5 Mir7075-201ENSMUST00000184187 82 ntBASIC19.3■□□□□ 0.68
RpgrQ9R0X5 Spcs1-204ENSMUST00000226782 949 ntBASIC19.3■□□□□ 0.68
RpgrQ9R0X5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RpgrQ9R0X5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RpgrQ9R0X5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RpgrQ9R0X5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RpgrQ9R0X5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RpgrQ9R0X5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.29■□□□□ 0.68
RpgrQ9R0X5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RpgrQ9R0X5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RpgrQ9R0X5 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RpgrQ9R0X5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RpgrQ9R0X5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RpgrQ9R0X5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RpgrQ9R0X5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RpgrQ9R0X5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RpgrQ9R0X5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RpgrQ9R0X5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RpgrQ9R0X5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.27■□□□□ 0.68
RpgrQ9R0X5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
RpgrQ9R0X5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RpgrQ9R0X5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RpgrQ9R0X5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RpgrQ9R0X5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RpgrQ9R0X5 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.27■□□□□ 0.68
RpgrQ9R0X5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
RpgrQ9R0X5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RpgrQ9R0X5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RpgrQ9R0X5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RpgrQ9R0X5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RpgrQ9R0X5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RpgrQ9R0X5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RpgrQ9R0X5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RpgrQ9R0X5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RpgrQ9R0X5 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.26■□□□□ 0.67
RpgrQ9R0X5 Gm8493-201ENSMUST00000196881 489 ntBASIC19.26■□□□□ 0.67
RpgrQ9R0X5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RpgrQ9R0X5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.26■□□□□ 0.67
RpgrQ9R0X5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RpgrQ9R0X5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RpgrQ9R0X5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RpgrQ9R0X5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RpgrQ9R0X5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RpgrQ9R0X5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RpgrQ9R0X5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RpgrQ9R0X5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RpgrQ9R0X5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RpgrQ9R0X5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RpgrQ9R0X5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RpgrQ9R0X5 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RpgrQ9R0X5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RpgrQ9R0X5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.25■□□□□ 0.67
RpgrQ9R0X5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RpgrQ9R0X5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RpgrQ9R0X5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RpgrQ9R0X5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.24■□□□□ 0.67
RpgrQ9R0X5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RpgrQ9R0X5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RpgrQ9R0X5 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RpgrQ9R0X5 Gm45417-201ENSMUST00000209533 758 ntBASIC19.24■□□□□ 0.67
RpgrQ9R0X5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RpgrQ9R0X5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RpgrQ9R0X5 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RpgrQ9R0X5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms