Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shroom3Q9QXN0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Shroom3Q9QXN0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shroom3Q9QXN0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Shroom3Q9QXN0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shroom3Q9QXN0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shroom3Q9QXN0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.22■□□□□ 0.67
Shroom3Q9QXN0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.22■□□□□ 0.67
Shroom3Q9QXN0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shroom3Q9QXN0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shroom3Q9QXN0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Shroom3Q9QXN0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
Shroom3Q9QXN0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Shroom3Q9QXN0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.21■□□□□ 0.67
Shroom3Q9QXN0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shroom3Q9QXN0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shroom3Q9QXN0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.21■□□□□ 0.67
Shroom3Q9QXN0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Shroom3Q9QXN0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Shroom3Q9QXN0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shroom3Q9QXN0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shroom3Q9QXN0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Shroom3Q9QXN0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shroom3Q9QXN0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shroom3Q9QXN0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shroom3Q9QXN0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shroom3Q9QXN0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Shroom3Q9QXN0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Shroom3Q9QXN0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.21■□□□□ 0.67
Shroom3Q9QXN0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shroom3Q9QXN0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Shroom3Q9QXN0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Shroom3Q9QXN0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shroom3Q9QXN0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shroom3Q9QXN0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Shroom3Q9QXN0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shroom3Q9QXN0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.2■□□□□ 0.66
Shroom3Q9QXN0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Shroom3Q9QXN0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shroom3Q9QXN0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.2■□□□□ 0.66
Shroom3Q9QXN0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Shroom3Q9QXN0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Shroom3Q9QXN0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shroom3Q9QXN0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shroom3Q9QXN0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shroom3Q9QXN0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Shroom3Q9QXN0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Shroom3Q9QXN0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Shroom3Q9QXN0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Shroom3Q9QXN0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shroom3Q9QXN0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.19■□□□□ 0.66
Shroom3Q9QXN0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Shroom3Q9QXN0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shroom3Q9QXN0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Shroom3Q9QXN0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Shroom3Q9QXN0 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.18■□□□□ 0.66
Shroom3Q9QXN0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shroom3Q9QXN0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shroom3Q9QXN0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shroom3Q9QXN0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shroom3Q9QXN0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Shroom3Q9QXN0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.17■□□□□ 0.66
Shroom3Q9QXN0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shroom3Q9QXN0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.17■□□□□ 0.66
Shroom3Q9QXN0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shroom3Q9QXN0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shroom3Q9QXN0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Shroom3Q9QXN0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shroom3Q9QXN0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shroom3Q9QXN0 Gm9988-201ENSMUST00000069786 435 ntBASIC19.17■□□□□ 0.66
Shroom3Q9QXN0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Shroom3Q9QXN0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shroom3Q9QXN0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shroom3Q9QXN0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Shroom3Q9QXN0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Shroom3Q9QXN0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.16■□□□□ 0.66
Shroom3Q9QXN0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.16■□□□□ 0.66
Shroom3Q9QXN0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shroom3Q9QXN0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shroom3Q9QXN0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.16■□□□□ 0.66
Shroom3Q9QXN0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shroom3Q9QXN0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shroom3Q9QXN0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.15■□□□□ 0.66
Shroom3Q9QXN0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Shroom3Q9QXN0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Shroom3Q9QXN0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shroom3Q9QXN0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.15■□□□□ 0.66
Shroom3Q9QXN0 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.15■□□□□ 0.66
Shroom3Q9QXN0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Shroom3Q9QXN0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.15■□□□□ 0.66
Shroom3Q9QXN0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shroom3Q9QXN0 Gm12933-201ENSMUST00000120203 872 ntBASIC19.14■□□□□ 0.65
Shroom3Q9QXN0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.14■□□□□ 0.65
Shroom3Q9QXN0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Shroom3Q9QXN0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shroom3Q9QXN0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Shroom3Q9QXN0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom3Q9QXN0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.13■□□□□ 0.65
Shroom3Q9QXN0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Shroom3Q9QXN0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms