Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh5Q9QUM7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh5Q9QUM7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.38■□□□□ 0.69
Msh5Q9QUM7 Mir7075-201ENSMUST00000184187 82 ntBASIC19.38■□□□□ 0.69
Msh5Q9QUM7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh5Q9QUM7 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.38■□□□□ 0.69
Msh5Q9QUM7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh5Q9QUM7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh5Q9QUM7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh5Q9QUM7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.38■□□□□ 0.69
Msh5Q9QUM7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Msh5Q9QUM7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Msh5Q9QUM7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh5Q9QUM7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Msh5Q9QUM7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Msh5Q9QUM7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh5Q9QUM7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh5Q9QUM7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh5Q9QUM7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh5Q9QUM7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Msh5Q9QUM7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh5Q9QUM7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh5Q9QUM7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Msh5Q9QUM7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh5Q9QUM7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Msh5Q9QUM7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Msh5Q9QUM7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh5Q9QUM7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh5Q9QUM7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh5Q9QUM7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Msh5Q9QUM7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Msh5Q9QUM7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh5Q9QUM7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Msh5Q9QUM7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Msh5Q9QUM7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.36■□□□□ 0.69
Msh5Q9QUM7 Trmt13-210ENSMUST00000198454 880 ntBASIC19.36■□□□□ 0.69
Msh5Q9QUM7 Gm43416-201ENSMUST00000201916 1015 ntBASIC19.36■□□□□ 0.69
Msh5Q9QUM7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh5Q9QUM7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh5Q9QUM7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Msh5Q9QUM7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Msh5Q9QUM7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh5Q9QUM7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Msh5Q9QUM7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Msh5Q9QUM7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Msh5Q9QUM7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Msh5Q9QUM7 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.35■□□□□ 0.69
Msh5Q9QUM7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh5Q9QUM7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh5Q9QUM7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh5Q9QUM7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Msh5Q9QUM7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh5Q9QUM7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Msh5Q9QUM7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh5Q9QUM7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh5Q9QUM7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Msh5Q9QUM7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Msh5Q9QUM7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh5Q9QUM7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Msh5Q9QUM7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh5Q9QUM7 Gm12251-201ENSMUST00000117893 792 ntBASIC19.34■□□□□ 0.69
Msh5Q9QUM7 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.34■□□□□ 0.69
Msh5Q9QUM7 Spcs1-204ENSMUST00000226782 949 ntBASIC19.34■□□□□ 0.69
Msh5Q9QUM7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh5Q9QUM7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Msh5Q9QUM7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh5Q9QUM7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh5Q9QUM7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh5Q9QUM7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Msh5Q9QUM7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Msh5Q9QUM7 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.34■□□□□ 0.69
Msh5Q9QUM7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Msh5Q9QUM7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Msh5Q9QUM7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Msh5Q9QUM7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.33■□□□□ 0.69
Msh5Q9QUM7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.33■□□□□ 0.68
Msh5Q9QUM7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msh5Q9QUM7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Msh5Q9QUM7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msh5Q9QUM7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Msh5Q9QUM7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msh5Q9QUM7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Msh5Q9QUM7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.33■□□□□ 0.68
Msh5Q9QUM7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh5Q9QUM7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.32■□□□□ 0.68
Msh5Q9QUM7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.32■□□□□ 0.68
Msh5Q9QUM7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Msh5Q9QUM7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh5Q9QUM7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh5Q9QUM7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.32■□□□□ 0.68
Msh5Q9QUM7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Msh5Q9QUM7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh5Q9QUM7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh5Q9QUM7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh5Q9QUM7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh5Q9QUM7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Msh5Q9QUM7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh5Q9QUM7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.31■□□□□ 0.68
Msh5Q9QUM7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Msh5Q9QUM7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms